RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 KBTBD4Q9NVX7 518 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 SPG21Q9NZD8 308 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 TFIP11Q9UBB9 837 aaKnown RBP9.68□□□□□ -0.86
SSBP4-208ENST00000600628 DNAJB4Q9UDY4 337 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 USP20Q9Y2K6 914 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 VWA8A3KMH1 1905 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 TCF20Q9UGU0 1960 aaKnown RBP9.67□□□□□ -0.86
SSBP4-208ENST00000600628 FAM237AA0A1B0GTK4 181 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 MYMKA6NI61 221 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 SFI1A8K8P3 1242 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 K7ERI5 159 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 SLC16A4O15374 487 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 NCK2O43639 380 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 CUTAO60888 179 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 LILRB3O75022 631 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 PAPLNO95428 1278 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 GLP2RO95838 553 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 ADRB2P07550 413 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 PBX3P40426 434 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 KCNQ1P51787 676 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 GTF2BQ00403 316 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 NCBP1Q09161 790 aaKnown RBP9.67□□□□□ -0.86
SSBP4-208ENST00000600628 DMP1Q13316 513 aaPredicted RBP9.67□□□□□ -0.86
SSBP4-208ENST00000600628 ADAM15Q13444 863 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 SPOUT1Q5T280 376 aaKnown RBP9.67□□□□□ -0.86
SSBP4-208ENST00000600628 ATF7IP2Q5U623 682 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 ZPBP2Q6X784 338 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 ADGRD2Q7Z7M1 963 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 DDX53Q86TM3 631 aaKnown RBP9.67□□□□□ -0.86
SSBP4-208ENST00000600628 GPBP1Q86WP2 473 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 RNF169Q8NCN4 708 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 CDK5RAP3Q96JB5 506 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 ZNF396Q96N95 335 aaPredicted RBP9.67□□□□□ -0.86
SSBP4-208ENST00000600628 GAD1Q99259 594 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 ZBP1Q9H171 429 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 CDT1Q9H211 546 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 CXCL16Q9H2A7 254 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 UBE2ZQ9H832 354 aaPredicted RBP9.67□□□□□ -0.86
SSBP4-208ENST00000600628 KMT5AQ9NQR1 393 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 MARCH5Q9NX47 278 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 LARSQ9P2J5 1176 aaKnown RBP9.67□□□□□ -0.86
SSBP4-208ENST00000600628 STYXL1Q9Y6J8 313 aa9.67□□□□□ -0.86
SSBP4-208ENST00000600628 MTCL1Q9Y4B5 1905 aaKnown RBP9.66□□□□□ -0.86
SSBP4-208ENST00000600628 TOM1L1O75674 476 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 RECQL4O94761 1208 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 NPTXRO95502 500 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 ITGA4P13612 1032 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 MLH1P40692 756 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 GRM5P41594 1212 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 SLC11A1P49279 550 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 ALDH7A1P49419 539 aaKnown RBP9.66□□□□□ -0.86
SSBP4-208ENST00000600628 SCNN1GP51170 649 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 CEBPZQ03701 1054 aaKnown RBP9.66□□□□□ -0.86
SSBP4-208ENST00000600628 MCL1Q07820 350 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 EHHADHQ08426 723 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 RAD51AP2Q09MP3 1159 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 STK38Q15208 465 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 DCAF4L1Q3SXM0 396 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 LEXMQ3ZCV2 418 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 RESP18Q5W5W9 173 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 SLC39A4Q6P5W5 647 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 CCDC73Q6ZRK6 1079 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 HAUS6Q7Z4H7 955 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 MAP4K3Q8IVH8 894 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 GPR65Q8IYL9 337 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 EFHBQ8N7U6 833 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 VN1R2Q8NFZ6 395 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 DEPTORQ8TB45 409 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 KCNG4Q8TDN1 519 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 ADAMTS19Q8TE59 1207 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 MSLNLQ96KJ4 702 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 PPP1R10Q96QC0 940 aaKnown RBP9.66□□□□□ -0.86
SSBP4-208ENST00000600628 CUEDC2Q9H467 287 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 PARVGQ9HBI0 331 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 NGRNQ9NPE2 291 aaKnown RBP9.66□□□□□ -0.86
SSBP4-208ENST00000600628 TLR9Q9NR96 1032 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 OLFML3Q9NRN5 406 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 SEL1LQ9UBV2 794 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 PCDHA7Q9UN72 937 aa9.66□□□□□ -0.86
SSBP4-208ENST00000600628 CCDC169A6NNP5 214 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 H0YCG3 227 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 NRP1O14786 923 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 ZC3H11AO75152 810 aaKnown RBP eCLIP9.65□□□□□ -0.86
SSBP4-208ENST00000600628 TBX10O75333 385 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 POMCP01189 267 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 CTSAP10619 480 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 MCF2P10911 925 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 KCNA5P22460 613 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 AKAP5P24588 427 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 GTF2F1P35269 517 aaKnown RBP eCLIP9.65□□□□□ -0.862e-6■■■□□ 17.2
SSBP4-208ENST00000600628 SMTNP53814 917 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 DNM1Q05193 864 aaKnown RBP9.65□□□□□ -0.86
SSBP4-208ENST00000600628 DLX2Q07687 328 aaPredicted RBP9.65□□□□□ -0.86
SSBP4-208ENST00000600628 GRIK3Q13003 919 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 ZRSR1Q15695 479 aaKnown RBP9.65□□□□□ -0.86
SSBP4-208ENST00000600628 DUSP6Q16828 381 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 LONRF3Q496Y0 759 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 MPZL3Q6UWV2 235 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 CD300LGQ6UXG3 332 aa9.65□□□□□ -0.86
SSBP4-208ENST00000600628 ZNF720Q7Z2F6 126 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms