RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 ZNF410Q86VK4 478 aa21.74■■□□□ 1.07
PNKP-214ENST00000600573 JAKMIP2Q96AA8 810 aa21.74■■□□□ 1.07
PNKP-214ENST00000600573 FAM81BQ96LP2 452 aa21.74■■□□□ 1.07
PNKP-214ENST00000600573 ACO2Q99798 780 aaKnown RBP21.74■■□□□ 1.07
PNKP-214ENST00000600573 FAM213AQ9BRX8 229 aa21.74■■□□□ 1.07
PNKP-214ENST00000600573 MSTO1Q9BUK6 570 aa21.74■■□□□ 1.07
PNKP-214ENST00000600573 STK33Q9BYT3 514 aa21.74■■□□□ 1.07
PNKP-214ENST00000600573 TSGA10Q9BZW7 698 aa21.74■■□□□ 1.07
PNKP-214ENST00000600573 INTS2Q9H0H0 1204 aaKnown RBP21.74■■□□□ 1.07
PNKP-214ENST00000600573 COQ4Q9Y3A0 265 aa21.74■■□□□ 1.07
PNKP-214ENST00000600573 URI1O94763 535 aaPredicted RBP21.73■■□□□ 1.07
PNKP-214ENST00000600573 ECM2O94769 699 aaPredicted RBP21.73■■□□□ 1.07
PNKP-214ENST00000600573 GNRH1P01148 92 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 ADRB2P07550 413 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 FLT3LGP49771 235 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 NKX3-2P78367 333 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 POU5F1Q01860 360 aaKnown RBP21.73■■□□□ 1.07
PNKP-214ENST00000600573 RAPGEF1Q13905 1077 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 SURF1Q15526 300 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 ASIC2Q16515 512 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 ZNF569Q5MCW4 686 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 ERO1AQ96HE7 468 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 SPC25Q9HBM1 224 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 SIX2Q9NPC8 291 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 APEX2Q9UBZ4 518 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 HAS3O00219 553 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 LCA5LO95447 670 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 GNAT1P11488 350 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 MATR3P43243 847 aaKnown RBP eCLIP21.73■■□□□ 1.07
PNKP-214ENST00000600573 VAV2P52735 878 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 AP3M2P53677 418 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 DLG4P78352 724 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 PPP3CAQ08209 521 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 PCBP1Q15365 356 aaKnown RBP eCLIP21.73■■□□□ 1.07
PNKP-214ENST00000600573 EPC2Q52LR7 807 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 TDRD12Q587J7 1177 aaKnown RBP21.73■■□□□ 1.07
PNKP-214ENST00000600573 C1orf220Q5T0J3 134 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 NLRP4Q96MN2 994 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 FNBP1Q96RU3 617 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 AKT3Q9Y243 479 aa21.73■■□□□ 1.07
PNKP-214ENST00000600573 KRT86O43790 486 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 AKR1B10O60218 316 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 PLEKP08567 350 aaPredicted RBP21.72■■□□□ 1.07
PNKP-214ENST00000600573 ACTN1P12814 892 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 CYBAP13498 195 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 STAT1P42224 750 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 GJA9P57773 515 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 MCL1Q07820 350 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 PRPF4BQ13523 1007 aaKnown RBP21.72■■□□□ 1.07
PNKP-214ENST00000600573 MFSD10Q14728 455 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 ARHGEF6Q15052 776 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 FSCN1Q16658 493 aaKnown RBP21.72■■□□□ 1.07
PNKP-214ENST00000600573 KYAT1Q16773 422 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 KIAA0753Q2KHM9 967 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 HGSNATQ68CP4 663 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 SRGAP1Q7Z6B7 1085 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 TCHPQ9BT92 498 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 TMEM117Q9H0C3 514 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 LUC7LQ9NQ29 371 aaKnown RBP21.72■■□□□ 1.07
PNKP-214ENST00000600573 TNFSF13BQ9Y275 285 aa21.72■■□□□ 1.07
PNKP-214ENST00000600573 SMIM35A0A1B0GVV1 85 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 LRRIQ3A6PVS8 624 aaPredicted RBP21.71■■□□□ 1.07
PNKP-214ENST00000600573 INO80B-WBP1J3KQ70 363 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 ZC3H11AO75152 810 aaKnown RBP eCLIP21.71■■□□□ 1.07
PNKP-214ENST00000600573 FERP16591 822 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 GCLMP48507 274 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 PSEN2P49810 448 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 JAM2P57087 298 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 APBA1Q02410 837 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 MBTD1Q05BQ5 628 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 MARCH8Q5T0T0 291 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 CCDC122Q5T0U0 273 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 SLC35F6Q8N357 371 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 LMO3Q8TAP4 145 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 PLEKHO2Q8TD55 490 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 KAT2BQ92831 832 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 CCDC127Q96BQ5 260 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 IRX2Q9BZI1 471 aaPredicted RBP21.71■■□□□ 1.07
PNKP-214ENST00000600573 INO80BQ9C086 356 aaPredicted RBP21.71■■□□□ 1.07
PNKP-214ENST00000600573 FHOD1Q9Y613 1164 aa21.71■■□□□ 1.07
PNKP-214ENST00000600573 MBLAC1A4D2B0 266 aaPredicted RBP21.7■■□□□ 1.06
PNKP-214ENST00000600573 OGTO15294 1046 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 SEPT4O43236 478 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 SMIM10L2AP0DMW4 78 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 SMIM10L2BP0DMW5 78 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 PROZP22891 400 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 PRKCIP41743 596 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 SMYD5Q6GMV2 418 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 NFRKBQ6P4R8 1299 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 MPZL3Q6UWV2 235 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 ZSWIM2Q8NEG5 633 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 IFIH1Q9BYX4 1025 aaKnown RBP21.7■■□□□ 1.06
PNKP-214ENST00000600573 ARHGAP39Q9C0H5 1083 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 IFT122Q9HBG6 1241 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 RBAKQ9NYW8 714 aaPredicted RBP21.7■■□□□ 1.06
PNKP-214ENST00000600573 GUCA1BQ9UMX6 200 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 GABRQQ9UN88 632 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 DOCK3Q8IZD9 2030 aa21.7■■□□□ 1.06
PNKP-214ENST00000600573 CTAGE9A4FU28 777 aa21.69■■□□□ 1.06
PNKP-214ENST00000600573 TBC1D8O95759 1140 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms