RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 PHF7Q9BWX1 381 aaPredicted RBP17.25■□□□□ 0.35
IRF3-226ENST00000600453 NXF3Q9H4D5 531 aaKnown RBP17.25■□□□□ 0.35
IRF3-226ENST00000600453 HCFC2Q9Y5Z7 792 aa17.25■□□□□ 0.35
IRF3-226ENST00000600453 MUC3AQ02505 3323 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 CCDC169A6NNP5 214 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 SOD2P04179 222 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 LIG1P18858 919 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 AKAP5P24588 427 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 CDC25AP30304 524 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 SCNN1GP51170 649 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 SMTNP53814 917 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 DSC1Q08554 894 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 GRIK3Q13003 919 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 ZRSR1Q15695 479 aaKnown RBP17.24■□□□□ 0.35
IRF3-226ENST00000600453 RINT1Q6NUQ1 792 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 ELMSAN1Q6PJG2 1045 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 CDR2LQ86X02 465 aaPredicted RBP17.24■□□□□ 0.35
IRF3-226ENST00000600453 VN1R2Q8NFZ6 395 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 CALML4Q96GE6 196 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 ZFP42Q96MM3 310 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 NECTIN4Q96NY8 510 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 MMTAG2Q9BU76 263 aaKnown RBP17.24■□□□□ 0.35
IRF3-226ENST00000600453 CCDC113Q9H0I3 377 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 S1PR5Q9H228 398 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 PDZD7Q9H5P4 517 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 TMEM134Q9H6X4 195 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 DZANK1Q9NVP4 752 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 MIOSQ9NXC5 875 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 DPP7Q9UHL4 492 aa17.24■□□□□ 0.35
IRF3-226ENST00000600453 TDRD15B5MCY1 1934 aaKnown RBP17.23■□□□□ 0.35
IRF3-226ENST00000600453 PP2D1A8MPX8 630 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 DCXO43602 365 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 HIP1RO75146 1068 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 GUCY2CP25092 1073 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 UBA7P41226 1012 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 PEX3P56589 373 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 CBX2Q14781 532 aaPredicted RBP17.23■□□□□ 0.35
IRF3-226ENST00000600453 KIAA1841Q6NSI8 718 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 C1orf186Q6ZWK4 172 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 GPR65Q8IYL9 337 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 SYT2Q8N9I0 419 aaPredicted RBP17.23■□□□□ 0.35
IRF3-226ENST00000600453 SUSD6Q92537 303 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 INTS4Q96HW7 963 aaKnown RBP17.23■□□□□ 0.35
IRF3-226ENST00000600453 NTPCRQ9BSD7 190 aaKnown RBP17.23■□□□□ 0.35
IRF3-226ENST00000600453 KMT5AQ9NQR1 393 aa17.23■□□□□ 0.35
IRF3-226ENST00000600453 PRG3Q9Y2Y8 225 aaPredicted RBP17.23■□□□□ 0.35
IRF3-226ENST00000600453 URODP06132 367 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 THP07101 528 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 KLRC2P26717 231 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 LONP1P36776 959 aaKnown RBP17.22■□□□□ 0.35
IRF3-226ENST00000600453 NPTX2P47972 431 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
IRF3-226ENST00000600453 PTPN14Q15678 1187 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 ATF7IP2Q5U623 682 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 SYCE2Q6PIF2 218 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 GSTCDQ8NEC7 633 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 BCL7CQ8WUZ0 217 aaPredicted RBP17.22■□□□□ 0.35
IRF3-226ENST00000600453 RIPOR3Q96MK2 946 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 ADAM7Q9H2U9 754 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 POLD4Q9HCU8 107 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 SNTG2Q9NY99 539 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 KLK14Q9P0G3 267 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 TNFSF13BQ9Y275 285 aa17.22■□□□□ 0.35
IRF3-226ENST00000600453 VPS37CA5D8V6 355 aaPredicted RBP17.21■□□□□ 0.35
IRF3-226ENST00000600453 LOC730098B7Z3J9 87 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 H0YCG3 227 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 B4GALT3O60512 393 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 TADA2AO75478 443 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 C1RP00736 705 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 SSBP05455 408 aaKnown RBP eCLIP17.21■□□□□ 0.35
IRF3-226ENST00000600453 COL9A1P20849 921 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 MTHFRP42898 656 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 TUSC3Q13454 348 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 ATAT1Q5SQI0 421 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 CABP7Q86V35 215 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 SPIRE2Q8WWL2 714 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 AUTS2Q8WXX7 1259 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 KLHL5Q96PQ7 755 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 HERC2P3Q9BVR0 1158 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 MRPL4Q9BYD3 311 aaKnown RBP17.21■□□□□ 0.35
IRF3-226ENST00000600453 NR2E1Q9Y466 385 aa17.21■□□□□ 0.35
IRF3-226ENST00000600453 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 LILRB3O75022 631 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 ADH1AP07327 375 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 PLA2G4BP0C869 781 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 SCP2P22307 547 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 GLUD2P49448 558 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 YARSP54577 528 aaKnown RBP17.2■□□□□ 0.34
IRF3-226ENST00000600453 CREMQ03060 361 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 STRN3Q13033 797 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 USP41Q3LFD5 358 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 NT5DC1Q5TFE4 455 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 RNF135Q8IUD6 432 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 SLC22A17Q8WUG5 538 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 KHSRPQ92945 711 aaKnown RBP eCLIP17.2■□□□□ 0.34
IRF3-226ENST00000600453 RPGRIP1Q96KN7 1286 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 PNMA5Q96PV4 448 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 LRFN3Q9BTN0 628 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 KIFC3Q9BVG8 833 aa17.2■□□□□ 0.34
IRF3-226ENST00000600453 RUSC1Q9BVN2 902 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms