RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CD207Q9UJ71 328 aa24.89■■□□□ 1.58
CCDC9-204ENST00000599398 BARX2Q9UMQ3 279 aaPredicted RBP24.89■■□□□ 1.58
CCDC9-204ENST00000599398 FSD2A1L4K1 749 aa24.88■■□□□ 1.57
CCDC9-204ENST00000599398 INPPL1O15357 1258 aa24.88■■□□□ 1.57
CCDC9-204ENST00000599398 OR1G1P47890 313 aa24.88■■□□□ 1.57
CCDC9-204ENST00000599398 DHX8Q14562 1220 aaKnown RBP24.88■■□□□ 1.57
CCDC9-204ENST00000599398 KARSQ15046 597 aaKnown RBP24.88■■□□□ 1.57
CCDC9-204ENST00000599398 PTPAQ15257 358 aa24.88■■□□□ 1.57
CCDC9-204ENST00000599398 EEF1DP3Q658K8 133 aa24.88■■□□□ 1.57
CCDC9-204ENST00000599398 ZSCAN16Q9H4T2 348 aaPredicted RBP24.88■■□□□ 1.57
CCDC9-204ENST00000599398 C17orf75Q9HAS0 396 aa24.88■■□□□ 1.57
CCDC9-204ENST00000599398 PRG3Q9Y2Y8 225 aaPredicted RBP24.88■■□□□ 1.57
CCDC9-204ENST00000599398 PHLPP2Q6ZVD8 1323 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 NRP1O14786 923 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 CXCL14O95715 111 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 GLP2RO95838 553 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 RBM10P98175 930 aaKnown RBP24.87■■□□□ 1.57
CCDC9-204ENST00000599398 NT5DC1Q5TFE4 455 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 ATF7IP2Q5U623 682 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 COLGALT2Q8IYK4 626 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 MRPL43Q8N983 215 aaKnown RBP24.87■■□□□ 1.57
CCDC9-204ENST00000599398 TMEM87AQ8NBN3 555 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 AUTS2Q8WXX7 1259 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 ZBP1Q9H171 429 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 SNTG2Q9NY99 539 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 KCND2Q9NZV8 630 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 CLEC1BQ9P126 229 aa24.87■■□□□ 1.57
CCDC9-204ENST00000599398 NPHP3-ACAD11A0A0J9YXS1 232 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.86■■□□□ 1.57
CCDC9-204ENST00000599398 C2orf71A6NGG8 1288 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 SLC16A4O15374 487 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 NR1I2O75469 434 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 SRGAP2BP0DMP2 458 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 PLCG1P19174 1290 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 CACNB1Q02641 598 aaPredicted RBP24.86■■□□□ 1.57
CCDC9-204ENST00000599398 DCAF4L1Q3SXM0 396 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 SPECC1Q5M775 1068 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 LLGL2Q6P1M3 1020 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 GPBP1Q86WP2 473 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 ARHGAP28Q9P2N2 729 aa24.86■■□□□ 1.57
CCDC9-204ENST00000599398 RBM19Q9Y4C8 960 aaKnown RBP24.86■■□□□ 1.57
CCDC9-204ENST00000599398 MBTPS2O43462 519 aa24.85■■□□□ 1.57
CCDC9-204ENST00000599398 PLS3P13797 630 aa24.85■■□□□ 1.57
CCDC9-204ENST00000599398 SMTNP53814 917 aa24.85■■□□□ 1.57
CCDC9-204ENST00000599398 SMAD4Q13485 552 aaKnown RBP24.85■■□□□ 1.57
CCDC9-204ENST00000599398 APBB1IPQ7Z5R6 666 aaPredicted RBP24.85■■□□□ 1.57
CCDC9-204ENST00000599398 FAM178BQ8IXR5 827 aa24.85■■□□□ 1.57
CCDC9-204ENST00000599398 VN1R2Q8NFZ6 395 aa24.85■■□□□ 1.57
CCDC9-204ENST00000599398 MSLNLQ96KJ4 702 aa24.85■■□□□ 1.57
CCDC9-204ENST00000599398 TMEM134Q9H6X4 195 aa24.85■■□□□ 1.57
CCDC9-204ENST00000599398 GDAQ9Y2T3 454 aa24.85■■□□□ 1.57
CCDC9-204ENST00000599398 ZMYM2Q9UBW7 1377 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 RECQL4O94761 1208 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 CTSAP10619 480 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 DSC1Q08554 894 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 GRIK3Q13003 919 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 MCM6Q14566 821 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 GSTCDQ8NEC7 633 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 RAD54LQ92698 747 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 EPSTI1Q96J88 318 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 USP28Q96RU2 1077 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 VN1R3Q9BXE9 311 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 MRPL4Q9BYD3 311 aaKnown RBP24.84■■□□□ 1.57
CCDC9-204ENST00000599398 BLOC1S4Q9NUP1 217 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 STK39Q9UEW8 545 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 KCNG1Q9UIX4 513 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 FBXO2Q9UK22 296 aaPredicted RBP24.84■■□□□ 1.57
CCDC9-204ENST00000599398 TNFSF13BQ9Y275 285 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 SRPRBQ9Y5M8 271 aaKnown RBP24.84■■□□□ 1.57
CCDC9-204ENST00000599398 C5orf42Q9H799 3197 aa24.84■■□□□ 1.57
CCDC9-204ENST00000599398 KRT18P05783 430 aaKnown RBP24.83■■□□□ 1.57
CCDC9-204ENST00000599398 SSTR3P32745 418 aaPredicted RBP24.83■■□□□ 1.57
CCDC9-204ENST00000599398 STRN3Q13033 797 aa24.83■■□□□ 1.57
CCDC9-204ENST00000599398 ARSHQ5FYA8 562 aa24.83■■□□□ 1.57
CCDC9-204ENST00000599398 FOXD4L5Q5VV16 416 aaPredicted RBP24.83■■□□□ 1.57
CCDC9-204ENST00000599398 TAS1R3Q7RTX0 852 aa24.83■■□□□ 1.57
CCDC9-204ENST00000599398 LRRC15Q8TF66 581 aa24.83■■□□□ 1.57
CCDC9-204ENST00000599398 SPIRE2Q8WWL2 714 aa24.83■■□□□ 1.57
CCDC9-204ENST00000599398 FOXD4L4Q8WXT5 416 aaPredicted RBP24.83■■□□□ 1.57
CCDC9-204ENST00000599398 CLIC6Q96NY7 704 aa24.83■■□□□ 1.57
CCDC9-204ENST00000599398 ACO2Q99798 780 aaKnown RBP24.83■■□□□ 1.57
CCDC9-204ENST00000599398 CCSER1Q9C0I3 900 aa24.83■■□□□ 1.57
CCDC9-204ENST00000599398 MARCH5Q9NX47 278 aa24.83■■□□□ 1.57
CCDC9-204ENST00000599398 COASYQ13057 564 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 GIT2Q14161 759 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 ZNF568Q3ZCX4 644 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 USP49Q70CQ1 688 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 SPRYD3Q8NCJ5 442 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 SMRP1Q8NCR6 262 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 LARP4BQ92615 738 aaKnown RBP24.82■■□□□ 1.56
CCDC9-204ENST00000599398 REEP2Q9BRK0 252 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 NTPCRQ9BSD7 190 aaKnown RBP24.82■■□□□ 1.56
CCDC9-204ENST00000599398 TCHPQ9BT92 498 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 TARS2Q9BW92 718 aaKnown RBP24.82■■□□□ 1.56
CCDC9-204ENST00000599398 COLEC11Q9BWP8 271 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 LARSQ9P2J5 1176 aaKnown RBP24.82■■□□□ 1.56
CCDC9-204ENST00000599398 CCDC39Q9UFE4 941 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 MYH15Q9Y2K3 1946 aa24.82■■□□□ 1.56
CCDC9-204ENST00000599398 CLASP2O75122 1294 aaKnown RBP24.81■■□□□ 1.56
CCDC9-204ENST00000599398 TXLNAP40222 546 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms