RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 RRM2BQ7LG56 351 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 ASCC2Q9H1I8 757 aaPredicted RBP12.52□□□□□ -0.41
SCN8A-208ENST00000599343 TBXAS1P24557 533 aaPredicted RBP12.52□□□□□ -0.41
SCN8A-208ENST00000599343 GRAPQ13588 217 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 LMBRD2Q68DH5 695 aaPredicted RBP12.52□□□□□ -0.41
SCN8A-208ENST00000599343 ITPRIPL1Q6GPH6 555 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 LONP2Q86WA8 852 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 SLC44A5Q8NCS7 719 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 GRAPLQ8TC17 118 aaPredicted RBP12.52□□□□□ -0.41
SCN8A-208ENST00000599343 CALR3Q96L12 384 aaKnown RBP12.52□□□□□ -0.41
SCN8A-208ENST00000599343 BFARQ9NZS9 450 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 GABBR1Q9UBS5 961 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 STAP1Q9ULZ2 295 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 STK25O00506 426 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 MEFVO15553 781 aaPredicted RBP12.52□□□□□ -0.41
SCN8A-208ENST00000599343 FOXP4Q8IVH2 680 aaPredicted RBP12.52□□□□□ -0.41
SCN8A-208ENST00000599343 TMA16Q96EY4 203 aaKnown RBP12.52□□□□□ -0.41
SCN8A-208ENST00000599343 ACAP3Q96P50 834 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 LRRC1Q9BTT6 524 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 KDM5DQ9BY66 1539 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 APOL1O14791 398 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 CEP55Q53EZ4 464 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 TRABDQ9H4I3 376 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 NPHS2Q9NP85 383 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 APOA1P02647 267 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 MYBL1P10243 752 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 CDC27P30260 824 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 MRPL28Q13084 256 aaKnown RBP12.51□□□□□ -0.41
SCN8A-208ENST00000599343 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
SCN8A-208ENST00000599343 ELMOD1Q8N336 334 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 ARHGAP18Q8N392 663 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 TMCO5AQ8N6Q1 288 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 RMDN1Q96DB5 314 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 OSBPL5Q9H0X9 879 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-208ENST00000599343 NPHP3-ACAD11A0A0J9YXS1 232 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 PVALEFA0A1B0GWK0 134 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 SESN2P58004 480 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-208ENST00000599343 ARHGEF6Q15052 776 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 CNGA3Q16281 694 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 PID1Q7Z2X4 250 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 ADCK1Q86TW2 530 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 EML4Q9HC35 981 aaKnown RBP12.51□□□□□ -0.41
SCN8A-208ENST00000599343 CCDC78A2IDD5 438 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 EIF3EP60228 445 aaKnown RBP12.51□□□□□ -0.41
SCN8A-208ENST00000599343 VSNL1P62760 191 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 KRT72Q14CN4 511 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 SH2D3CQ8N5H7 860 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 PGBD4Q96DM1 585 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 SLC10A4Q96EP9 437 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 IL17RAQ96F46 866 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 FAM167AQ96KS9 214 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 BSDC1Q9NW68 430 aaPredicted RBP12.51□□□□□ -0.41
SCN8A-208ENST00000599343 LIMA1Q9UHB6 759 aaKnown RBP12.51□□□□□ -0.41
SCN8A-208ENST00000599343 MAD2L2Q9UI95 211 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 STK36Q9NRP7 1315 aa12.51□□□□□ -0.41
SCN8A-208ENST00000599343 A8MXQ7 604 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 CRKP46108 304 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 MAPRE2Q15555 327 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 HIF1AQ16665 826 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 PPHLN1Q8NEY8 458 aaKnown RBP12.5□□□□□ -0.41
SCN8A-208ENST00000599343 WDR24Q96S15 920 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 WWP1Q9H0M0 922 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 LY9Q9HBG7 655 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 HPS4Q9NQG7 708 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 E2F8A0AVK6 867 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 WBP4O75554 376 aaKnown RBP12.5□□□□□ -0.41
SCN8A-208ENST00000599343 SERPINI2O75830 405 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 LONRF1Q17RB8 773 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 ENAHQ8N8S7 591 aaPredicted RBP12.5□□□□□ -0.41
SCN8A-208ENST00000599343 CLMNQ96JQ2 1002 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 RNPC3Q96LT9 517 aaKnown RBP12.5□□□□□ -0.41
SCN8A-208ENST00000599343 MAGI2Q86UL8 1455 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
SCN8A-208ENST00000599343 SNAP23O00161 211 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 ANGPT2O15123 496 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 KCNN4O15554 427 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 CHN1P15882 459 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 TRIM60Q495X7 471 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 FBXW10Q5XX13 1052 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 CIAPIN1Q6FI81 312 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 TTC23LQ6PF05 361 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 FASTKD5Q7L8L6 764 aaKnown RBP12.5□□□□□ -0.41
SCN8A-208ENST00000599343 TRIM51Q9BSJ1 452 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 MARCOQ9UEW3 520 aaPredicted RBP12.5□□□□□ -0.41
SCN8A-208ENST00000599343 CYP26A1O43174 497 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 ADCY3O60266 1144 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 WDR47O94967 919 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 MAP4P27816 1152 aaKnown RBP12.5□□□□□ -0.41
SCN8A-208ENST00000599343 PRDX5P30044 214 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 LXNQ9BS40 222 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 ATP11BQ9Y2G3 1177 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 CYP2E1P05181 493 aaPredicted RBP12.5□□□□□ -0.41
SCN8A-208ENST00000599343 COG1Q8WTW3 980 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 CYGBQ8WWM9 190 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 RFFLQ8WZ73 363 aa12.5□□□□□ -0.41
SCN8A-208ENST00000599343 THAP11Q96EK4 314 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms