RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 GLULP15104 373 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 RFC5P40937 340 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 EMC2Q15006 297 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 AMHR2Q16671 573 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 SPECC1Q5M775 1068 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 C4orf19Q8IY42 314 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 HDAC7Q8WUI4 952 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 RABGGTAQ92696 567 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 NXPE3Q969Y0 559 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 FAM20AQ96MK3 541 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 LXNQ9BS40 222 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 RPP25Q9BUL9 199 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 XPNPEP1Q9NQW7 623 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 PPME1Q9Y570 386 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 RPL17P18621 184 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 YWHABP31946 246 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 PTENP60484 403 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 HTR4Q13639 388 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 CTTNQ14247 550 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 EPHA7Q15375 998 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 GALNT17Q6IS24 598 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 PHLDB3Q6NSJ2 640 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 GLYCTKQ8IVS8 523 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 EXOC8Q8IYI6 725 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 DYDC2Q96IM9 177 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 PRKD2Q9BZL6 878 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 CSRNP2Q9H175 543 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 SEMA4AQ9H3S1 761 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 PLEKHA4Q9H4M7 779 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 DPP7Q9UHL4 492 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 DOCK6Q96HP0 2047 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 EPG5Q9HCE0 2579 aa18.32■□□□□ 0.52
SHKBP1-215ENST00000597649 SPTBN2O15020 2390 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 MED19A0JLT2 244 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 DKC1O60832 514 aaKnown RBP eCLIP18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 DTNBO60941 627 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 SP9P0CG40 484 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 AKAP5P24588 427 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 AXLP30530 894 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 RABEP1Q15276 862 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 ANKRD1Q15327 319 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 XKR9Q5GH70 373 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 PPP4R3AQ6IN85 833 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 KRT25Q7Z3Z0 450 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 KIAA2013Q8IYS2 634 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 TCP11Q8WWU5 503 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 COLEC11Q9BWP8 271 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 APOL6Q9BWW8 343 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 NXF3Q9H4D5 531 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 PIDD1Q9HB75 910 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.31■□□□□ 0.521e-8■■■■■ 45.1
SHKBP1-215ENST00000597649 FNIP2Q9P278 1114 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 CACNG4Q9UBN1 327 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 GIT1Q9Y2X7 761 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 SIT1Q9Y3P8 196 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 NUMBLQ9Y6R0 609 aa18.31■□□□□ 0.52
SHKBP1-215ENST00000597649 TPRP12270 2363 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 POTEMA6NI47 508 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 LRRN2O75325 713 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 ERLIN2O94905 339 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 SLITRK3O94933 977 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 C1RP00736 705 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 ARF4P18085 180 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 RFX1P22670 979 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 CYP4A11Q02928 519 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 MBTD1Q05BQ5 628 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 SPIRE1Q08AE8 756 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 USP41Q3LFD5 358 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 FUT10Q6P4F1 479 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 NOTUMQ6P988 496 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 GET4Q7L5D6 327 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 CDR2LQ86X02 465 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 IFNLR1Q8IU57 520 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 C1orf210Q8IVY1 113 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 MAML2Q8IZL2 1156 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 OXER1Q8TDS5 423 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 ASAP3Q8TDY4 903 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 CCDC51Q96ER9 411 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 ZNF274Q96GC6 653 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 KIF2CQ99661 725 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 PHF20Q9BVI0 1012 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 FOXQ1Q9C009 403 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 ARHGEF3Q9NR81 526 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 SLC2A4RGQ9NR83 387 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 GJB4Q9NTQ9 266 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 ZDHHC7Q9NXF8 308 aa18.3■□□□□ 0.52
SHKBP1-215ENST00000597649 INO80B-WBP1J3KQ70 363 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 CPLX1O14810 134 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 B4GALT5O43286 388 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 CCNT1O60563 726 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 GPC5P78333 572 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 STK3Q13188 491 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 EARS2Q5JPH6 523 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 NCAPH2Q6IBW4 605 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 ELMSAN1Q6PJG2 1045 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 DCLRE1AQ6PJP8 1040 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 OTUD6AQ7L8S5 288 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 NEK8Q86SG6 692 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
SHKBP1-215ENST00000597649 DCLK2Q8N568 766 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms