RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 MIER3Q7Z3K6 550 aa12.22□□□□□ -0.45
ZNF548-207ENST00000597400 GSTCDQ8NEC7 633 aa12.22□□□□□ -0.45
ZNF548-207ENST00000597400 PHKBQ93100 1093 aa12.22□□□□□ -0.45
ZNF548-207ENST00000597400 KXD1Q9BQD3 176 aa12.22□□□□□ -0.45
ZNF548-207ENST00000597400 BCO2Q9BYV7 579 aa12.22□□□□□ -0.45
ZNF548-207ENST00000597400 C6orf50Q9HD87 102 aa12.22□□□□□ -0.45
ZNF548-207ENST00000597400 KANSL3Q9P2N6 904 aa12.22□□□□□ -0.45
ZNF548-207ENST00000597400 CDV3Q9UKY7 258 aaKnown RBP12.22□□□□□ -0.45
ZNF548-207ENST00000597400 GREB1Q4ZG55 1949 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 CNOT1A5YKK6 2376 aaKnown RBP12.21□□□□□ -0.45
ZNF548-207ENST00000597400 NID2Q14112 1375 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 FAM170BA6NMN3 283 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 TDGF1P13385 188 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 CPA1P15085 419 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 LMNB2Q03252 620 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 SLC44A4Q53GD3 710 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 RTP2Q5QGT7 225 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 ITFG1Q8TB96 612 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 ETNPPLQ8TBG4 499 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 FGF13Q92913 245 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 TMEM143Q96AN5 459 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 PAAF1Q9BRP4 392 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 ANO2Q9NQ90 1003 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 PRMT8Q9NR22 394 aaPredicted RBP12.21□□□□□ -0.45
ZNF548-207ENST00000597400 DPP7Q9UHL4 492 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 FBXW11Q9UKB1 542 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 CDH7Q9ULB5 785 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 USP18Q9UMW8 372 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 SSX2IPQ9Y2D8 614 aa12.21□□□□□ -0.45
ZNF548-207ENST00000597400 F5P12259 2224 aa12.21□□□□□ -0.46
ZNF548-207ENST00000597400 DDX11L8A8MPP1 907 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 EML1O00423 815 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 TSPAN1O60635 241 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 SRGAP2CP0DJJ0 459 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 ITGA4P13612 1032 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 PRKCQQ04759 706 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 LAMTOR4Q0VGL1 99 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 LPAL2Q16609 132 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 ELMSAN1Q6PJG2 1045 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 DHX32Q7L7V1 743 aaKnown RBP12.2□□□□□ -0.46
ZNF548-207ENST00000597400 RDM1Q8NG50 284 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 PRPF31Q8WWY3 499 aaKnown RBP12.2□□□□□ -0.46
ZNF548-207ENST00000597400 CLDN23Q96B33 292 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 SHDQ96IW2 340 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 CPB2Q96IY4 423 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 RTKNQ9BST9 563 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 OSBPL6Q9BZF3 934 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 NXF3Q9H4D5 531 aaKnown RBP12.2□□□□□ -0.46
ZNF548-207ENST00000597400 DHX33Q9H6R0 707 aaKnown RBP12.2□□□□□ -0.46
ZNF548-207ENST00000597400 HCFC1R1Q9NWW0 138 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 ZSCAN32Q9NX65 697 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 VPS54Q9P1Q0 977 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 FNIP2Q9P278 1114 aa12.2□□□□□ -0.46
ZNF548-207ENST00000597400 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.2□□□□□ -0.46
ZNF548-207ENST00000597400 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
ZNF548-207ENST00000597400 PRR5-ARHGAP8B1AHC4 643 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 CCL16O15467 120 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 ADAM12O43184 909 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 C1RP00736 705 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 GNA11P29992 359 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 USP11P51784 963 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 RCAN1P53805 252 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 ARHGAP8P85298 464 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 SPEM2Q0P670 501 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 NTRK3Q16288 839 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 AMHR2Q16671 573 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 USP41Q3LFD5 358 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 Q4G0T1 1027 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 TPRG1Q6ZUI0 275 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 SRGAP1Q7Z6B7 1085 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 NPAS3Q8IXF0 933 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 ZNF687Q8N1G0 1237 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 GPR161Q8N6U8 529 aaKnown RBP12.19□□□□□ -0.46
ZNF548-207ENST00000597400 TBCKQ8TEA7 893 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 HASPINQ8TF76 798 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 CCDC12Q8WUD4 166 aaPredicted RBP12.19□□□□□ -0.46
ZNF548-207ENST00000597400 ATRIPQ8WXE1 791 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 CLSTN3Q9BQT9 956 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 APOL6Q9BWW8 343 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 PLA2G2FQ9BZM2 168 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.19□□□□□ -0.46
ZNF548-207ENST00000597400 ADAM28Q9UKQ2 775 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 NAP1L2Q9ULW6 460 aaPredicted RBP12.19□□□□□ -0.46
ZNF548-207ENST00000597400 ZFP37Q9Y6Q3 630 aaPredicted RBP12.19□□□□□ -0.46
ZNF548-207ENST00000597400 EML5Q05BV3 1969 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 FAM208BQ5VWN6 2430 aa12.19□□□□□ -0.46
ZNF548-207ENST00000597400 NRG2O14511 850 aaPredicted RBP12.18□□□□□ -0.46
ZNF548-207ENST00000597400 PRPF3O43395 683 aaKnown RBP12.18□□□□□ -0.46
ZNF548-207ENST00000597400 SLC37A4O43826 429 aa12.18□□□□□ -0.46
ZNF548-207ENST00000597400 C8AP07357 584 aa12.18□□□□□ -0.46
ZNF548-207ENST00000597400 SDHBP21912 280 aa12.18□□□□□ -0.46
ZNF548-207ENST00000597400 AKAP5P24588 427 aa12.18□□□□□ -0.46
ZNF548-207ENST00000597400 MTAPQ13126 283 aa12.18□□□□□ -0.46
ZNF548-207ENST00000597400 PPM1JQ5JR12 505 aa12.18□□□□□ -0.46
ZNF548-207ENST00000597400 MTSS1LQ765P7 747 aa12.18□□□□□ -0.46
ZNF548-207ENST00000597400 CDR2LQ86X02 465 aaPredicted RBP12.18□□□□□ -0.46
ZNF548-207ENST00000597400 RNF149Q8NC42 400 aa12.18□□□□□ -0.46
ZNF548-207ENST00000597400 PSPC1Q8WXF1 523 aaKnown RBP12.18□□□□□ -0.46
ZNF548-207ENST00000597400 ING5Q8WYH8 240 aa12.18□□□□□ -0.46
ZNF548-207ENST00000597400 CXCL16Q9H2A7 254 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms