RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 GADD45BO75293 160 aaPredicted RBP18.38■□□□□ 0.53
CAPN12-206ENST00000597354 CSPG5O95196 566 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 GCNT3O95395 438 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 POMCP01189 267 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 MYBP10242 640 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 BMPR1AP36894 532 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 PBX3P40426 434 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 MATR3P43243 847 aaKnown RBP eCLIP18.38■□□□□ 0.53
CAPN12-206ENST00000597354 CASP5P51878 434 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 OSTNP61366 133 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 ZNF720Q7Z2F6 126 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 LRRC43Q8N309 656 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 CEP120Q8N960 986 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 CLP1Q92989 425 aaKnown RBP18.38■□□□□ 0.53
CAPN12-206ENST00000597354 ZFP42Q96MM3 310 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 CDT1Q9H211 546 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 PTPRHQ9HD43 1115 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 MIOSQ9NXC5 875 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 CHD9Q3L8U1 2897 aa18.38■□□□□ 0.53
CAPN12-206ENST00000597354 ZNF202O95125 648 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 PRR29P0C7W0 189 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 FOSL2P15408 326 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 LIG4P49917 911 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 GTF2BQ00403 316 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 RNASELQ05823 741 aaKnown RBP18.37■□□□□ 0.53
CAPN12-206ENST00000597354 KCNA1Q09470 495 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 GPM6BQ13491 265 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 DCAF4L1Q3SXM0 396 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 SEZ6Q53EL9 994 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 MPZL3Q6UWV2 235 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 HACE1Q8IYU2 909 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 GLIS3Q8NEA6 775 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 URGCPQ8TCY9 931 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 SAMD11Q96NU1 681 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 GAS2L1Q99501 681 aaPredicted RBP18.37■□□□□ 0.53
CAPN12-206ENST00000597354 CXCL16Q9H2A7 254 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 TBC1D13Q9NVG8 400 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 SEL1LQ9UBV2 794 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 USP25Q9UHP3 1055 aa18.37■□□□□ 0.53
CAPN12-206ENST00000597354 COL4A4P53420 1690 aaPredicted RBP18.37■□□□□ 0.53
CAPN12-206ENST00000597354 ARL5CA6NH57 179 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 TISP43B9A030 160 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 ANKRD63C9JTQ0 380 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 ABLIM1O14639 778 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 HNRNPDLO14979 420 aaKnown RBP18.36■□□□□ 0.53
CAPN12-206ENST00000597354 RECQL4O94761 1208 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 PRPF6O94906 941 aaKnown RBP18.36■□□□□ 0.53
CAPN12-206ENST00000597354 PROZP22891 400 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 SCNN1GP51170 649 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 KRBA2Q6ZNG9 492 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 ZNF280BQ86YH2 543 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 THNSL1Q8IYQ7 743 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 COLGALT1Q8NBJ5 622 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 HAPLN2Q9GZV7 340 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 CDH23Q9H251 3354 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 ALG13Q9NP73 1137 aaKnown RBP18.36■□□□□ 0.53
CAPN12-206ENST00000597354 UBN1Q9NPG3 1134 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 GIT1Q9Y2X7 761 aa18.36■□□□□ 0.53
CAPN12-206ENST00000597354 RALGAPA2Q2PPJ7 1873 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 NT5C1B-RDH14C9J2C7 533 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 B4GALT3O60512 393 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 LPXNO60711 386 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 ZC3H11AO75152 810 aaKnown RBP eCLIP18.35■□□□□ 0.53
CAPN12-206ENST00000597354 TOM1L1O75674 476 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 DDHD2O94830 711 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 CSPP1Q1MSJ5 1256 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 CNNM4Q6P4Q7 775 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 SLC39A4Q6P5W5 647 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 ZPBP2Q6X784 338 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 UNC13DQ70J99 1090 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 APBB1IPQ7Z5R6 666 aaPredicted RBP18.35■□□□□ 0.53
CAPN12-206ENST00000597354 MAP4K3Q8IVH8 894 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 FMR1NBQ8N0W7 255 aaPredicted RBP18.35■□□□□ 0.53
CAPN12-206ENST00000597354 MICALL1Q8N3F8 863 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 KLHL23Q8NBE8 558 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 SLC17A8Q8NDX2 589 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 MRPL9Q9BYD2 267 aaKnown RBP18.35■□□□□ 0.53
CAPN12-206ENST00000597354 ST6GALNAC4Q9H4F1 302 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 NRDE2Q9H7Z3 1164 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 OLFML3Q9NRN5 406 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 DNAJB4Q9UDY4 337 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 RWDD3Q9Y3V2 267 aa18.35■□□□□ 0.53
CAPN12-206ENST00000597354 H3BNC9 293 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 GRM6O15303 877 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 CLDN3O15551 220 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 PPP1R37O75864 691 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 MCF2P10911 925 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 LAG3P18627 525 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 NOLC1Q14978 699 aaKnown RBP eCLIP18.34■□□□□ 0.53
CAPN12-206ENST00000597354 KCNT2Q6UVM3 1135 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 PPM1EQ8WY54 764 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 ACCSQ96QU6 501 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 STRA6Q9BX79 667 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 AAASQ9NRG9 546 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 PCDHB13Q9Y5F0 798 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 PCDHB12Q9Y5F1 795 aa18.34■□□□□ 0.53
CAPN12-206ENST00000597354 GTPBP6O43824 516 aaPredicted RBP18.33■□□□□ 0.52
CAPN12-206ENST00000597354 KLRC4O43908 158 aa18.33■□□□□ 0.52
CAPN12-206ENST00000597354 ITGB1P05556 798 aa18.33■□□□□ 0.52
CAPN12-206ENST00000597354 RB1P06400 928 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms