RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 NPTXRO95502 500 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 ARF4P18085 180 aaPredicted RBP11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 RFX1P22670 979 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 AKAP5P24588 427 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 TXKP42681 527 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 DSG1Q02413 1049 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 MBTD1Q05BQ5 628 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 POU5F1BQ06416 359 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 DSC1Q08554 894 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 CAPSQ13938 189 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 ANKRD1Q15327 319 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 RIF1Q5UIP0 2472 aaKnown RBP11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 CWF19L1Q69YN2 538 aaKnown RBP11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 FUT10Q6P4F1 479 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 MAEAQ7L5Y9 396 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 ASCL5Q7RTU5 278 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 CDR2LQ86X02 465 aaPredicted RBP11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 SIX5Q8N196 739 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 SMG7Q92540 1137 aaKnown RBP11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 TTC12Q9H892 705 aaPredicted RBP11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 RXFP1Q9HBX9 757 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 WDR6Q9NNW5 1121 aaKnown RBP11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 ANKEF1Q9NU02 776 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 KLK14Q9P0G3 267 aa11.73□□□□□ -0.53
CHMP2A-202ENST00000596708 CACNA1IQ9P0X4 2223 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 CLUHO75153 1309 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 F8W810 466 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 B4GALT5O43286 388 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 NARSO43776 548 aaKnown RBP11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 TADA2AO75478 443 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 RFPL2O75678 378 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 LYPLA2O95372 231 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 CFHP08603 1231 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 NPR3P17342 541 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 AOC1P19801 751 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 GLRA2P23416 452 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 ARL2P36404 184 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 NBL1P41271 181 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 FOSBP53539 338 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 USP41Q3LFD5 358 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 SLC27A1Q6PCB7 646 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 CYP26C1Q6V0L0 522 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 RNF168Q8IYW5 571 aaPredicted RBP11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 NECAB1Q8N987 351 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 PIGOQ8TEQ8 1089 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 RSAD2Q8WXG1 361 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 RIN2Q8WYP3 895 aaPredicted RBP11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 RABGGTAQ92696 567 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 B3GALT6Q96L58 329 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 HSD17B14Q9BPX1 270 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 RTP3Q9BQQ7 232 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 POLR3FQ9H1D9 316 aaPredicted RBP11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 NXF3Q9H4D5 531 aaKnown RBP11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 PLEKHA4Q9H4M7 779 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 FANCMQ8IYD8 2048 aa11.72□□□□□ -0.53
CHMP2A-202ENST00000596708 PRR23AA6NEV1 266 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 LRRIQ4A6NIV6 560 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 BTBD18B2RXH4 712 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 TGM5O43548 720 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 USO1O60763 962 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 N4BP1O75113 896 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 FDPSP14324 419 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 RPL17P18621 184 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 RARRES1P49788 294 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 GRIK3Q13003 919 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 TRIM29Q14134 588 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 AMHR2Q16671 573 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 TMEM132AQ24JP5 1023 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 FRMD5Q7Z6J6 570 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 HDAC7Q8WUI4 952 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 NKD2Q969F2 451 aaPredicted RBP11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 MYADMQ96S97 322 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 GPR62Q9BZJ7 368 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 NT5C3AQ9H0P0 336 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 CHST7Q9NS84 486 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 ADAM28Q9UKQ2 775 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 CA14Q9ULX7 337 aa11.71□□□□□ -0.53
CHMP2A-202ENST00000596708 USP34Q70CQ2 3546 aa11.71□□□□□ -0.54
CHMP2A-202ENST00000596708 ZFHX2Q9C0A1 2572 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 A0A1B0GUA9 196 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 NEMFO60524 1076 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 EFEMP2O95967 443 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 XRCC6P12956 609 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 ATP2B1P20020 1258 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 ME3Q16798 604 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 CEP57Q86XR8 500 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 DIS3L2Q8IYB7 885 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 CCDC105Q8IYK2 499 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 SLC44A3Q8N4M1 653 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 DTWD2Q8NBA8 298 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 GSTCDQ8NEC7 633 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 TNFRSF25Q93038 417 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 SNX27Q96L92 541 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 NFKBIZQ9BYH8 718 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 RHOBTB2Q9BYZ6 727 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 GPRC5CQ9NQ84 441 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 FNIP2Q9P278 1114 aa11.7□□□□□ -0.54
CHMP2A-202ENST00000596708 EPS15L1Q9UBC2 864 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms