RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 RNASELQ05823 741 aaKnown RBP17.67■□□□□ 0.42
USHBP1-205ENST00000595993 PTPAQ15257 358 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 LONRF3Q496Y0 759 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 ARL6IP4Q66PJ3 421 aaKnown RBP17.67■□□□□ 0.42
USHBP1-205ENST00000595993 C15orf39Q6ZRI6 1047 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 SRGAP1Q7Z6B7 1085 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 CABP7Q86V35 215 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 ERMNQ8TAM6 284 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 NLRP4Q96MN2 994 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 KLHL5Q96PQ7 755 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 MMTAG2Q9BU76 263 aaKnown RBP17.67■□□□□ 0.42
USHBP1-205ENST00000595993 RHOBTB2Q9BYZ6 727 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 ZSCAN16Q9H4T2 348 aaPredicted RBP17.67■□□□□ 0.42
USHBP1-205ENST00000595993 MINDY3Q9H8M7 445 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 INPP5FQ9Y2H2 1132 aa17.67■□□□□ 0.42
USHBP1-205ENST00000595993 PAPLNO95428 1278 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 CNPP09543 421 aaKnown RBP17.66■□□□□ 0.42
USHBP1-205ENST00000595993 ZSCAN22P10073 491 aaPredicted RBP17.66■□□□□ 0.42
USHBP1-205ENST00000595993 CA8P35219 290 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 CCT6AP40227 531 aaKnown RBP17.66■□□□□ 0.42
USHBP1-205ENST00000595993 RFC5P40937 340 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 RARRES1P49788 294 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 GRIN1Q05586 938 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 HAUS3Q68CZ6 603 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 CWF19L1Q69YN2 538 aaKnown RBP17.66■□□□□ 0.42
USHBP1-205ENST00000595993 TMC5Q6UXY8 1006 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 OTUD6AQ7L8S5 288 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 RNF168Q8IYW5 571 aaPredicted RBP17.66■□□□□ 0.42
USHBP1-205ENST00000595993 CMASQ8NFW8 434 aaPredicted RBP17.66■□□□□ 0.42
USHBP1-205ENST00000595993 SNX29Q8TEQ0 813 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 PRPF31Q8WWY3 499 aaKnown RBP17.66■□□□□ 0.42
USHBP1-205ENST00000595993 USP28Q96RU2 1077 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 RAB34Q9BZG1 259 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 RSAD1Q9HA92 442 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 XPNPEP1Q9NQW7 623 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 ANKEF1Q9NU02 776 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 KANSL3Q9P2N6 904 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 DCHS1Q96JQ0 3298 aa17.66■□□□□ 0.42
USHBP1-205ENST00000595993 NCLP19338 710 aaKnown RBP17.65■□□□□ 0.42
USHBP1-205ENST00000595993 CEBPZQ03701 1054 aaKnown RBP17.65■□□□□ 0.42
USHBP1-205ENST00000595993 EMC2Q15006 297 aa17.65■□□□□ 0.42
USHBP1-205ENST00000595993 CCDC149Q6ZUS6 474 aa17.65■□□□□ 0.42
USHBP1-205ENST00000595993 ASCL5Q7RTU5 278 aa17.65■□□□□ 0.42
USHBP1-205ENST00000595993 EXOC8Q8IYI6 725 aa17.65■□□□□ 0.42
USHBP1-205ENST00000595993 TMEM87AQ8NBN3 555 aa17.65■□□□□ 0.42
USHBP1-205ENST00000595993 URGCPQ8TCY9 931 aa17.65■□□□□ 0.42
USHBP1-205ENST00000595993 SLC7A3Q8WY07 619 aa17.65■□□□□ 0.42
USHBP1-205ENST00000595993 TMEM143Q96AN5 459 aa17.65■□□□□ 0.42
USHBP1-205ENST00000595993 EMILIN2Q9BXX0 1053 aa17.65■□□□□ 0.42
USHBP1-205ENST00000595993 MARCH5Q9NX47 278 aa17.65■□□□□ 0.42
USHBP1-205ENST00000595993 PRR23AA6NEV1 266 aa17.64■□□□□ 0.41
USHBP1-205ENST00000595993 NRP1O14786 923 aa17.64■□□□□ 0.41
USHBP1-205ENST00000595993 GAS2O43903 313 aaKnown RBP17.64■□□□□ 0.41
USHBP1-205ENST00000595993 BMP15O95972 392 aa17.64■□□□□ 0.41
USHBP1-205ENST00000595993 F13A1P00488 732 aa17.64■□□□□ 0.41
USHBP1-205ENST00000595993 SOD2P04179 222 aa17.64■□□□□ 0.41
USHBP1-205ENST00000595993 LAMTOR4Q0VGL1 99 aa17.64■□□□□ 0.41
USHBP1-205ENST00000595993 OTOP3Q7RTS5 596 aa17.64■□□□□ 0.41
USHBP1-205ENST00000595993 SMG8Q8ND04 991 aaKnown RBP17.64■□□□□ 0.41
USHBP1-205ENST00000595993 PSPC1Q8WXF1 523 aaKnown RBP17.64■□□□□ 0.41
USHBP1-205ENST00000595993 ACSF2Q96CM8 615 aaPredicted RBP17.64■□□□□ 0.41
USHBP1-205ENST00000595993 GBP3Q9H0R5 595 aa17.64■□□□□ 0.41
USHBP1-205ENST00000595993 DUSP12Q9UNI6 340 aa17.64■□□□□ 0.41
USHBP1-205ENST00000595993 FRYLO94915 3013 aa17.64■□□□□ 0.41
USHBP1-205ENST00000595993 RIF1Q5UIP0 2472 aaKnown RBP17.63■□□□□ 0.41
USHBP1-205ENST00000595993 ALDH2P05091 517 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 XRCC6P12956 609 aaKnown RBP eCLIP17.63■□□□□ 0.41
USHBP1-205ENST00000595993 NPR3P17342 541 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 AOC1P19801 751 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 MUTP22033 750 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 DSC1Q08554 894 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 TDGQ13569 410 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 PCBP1Q15365 356 aaKnown RBP eCLIP17.63■□□□□ 0.41
USHBP1-205ENST00000595993 KRT79Q5XKE5 535 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 CYP26C1Q6V0L0 522 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 KCNK18Q7Z418 384 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 COLGALT2Q8IYK4 626 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 CNNM3Q8NE01 707 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 PNMA5Q96PV4 448 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 NACC1Q96RE7 527 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 RPS6KC1Q96S38 1066 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 HERC2P3Q9BVR0 1158 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 UBN1Q9NPG3 1134 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 MRPL17Q9NRX2 175 aaKnown RBP17.63■□□□□ 0.41
USHBP1-205ENST00000595993 DDX19AQ9NUU7 478 aaKnown RBP17.63■□□□□ 0.41
USHBP1-205ENST00000595993 FBXO2Q9UK22 296 aaPredicted RBP17.63■□□□□ 0.41
USHBP1-205ENST00000595993 KIAA1024Q9UPX6 916 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 FAN1Q9Y2M0 1017 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
USHBP1-205ENST00000595993 ASAP2O43150 1006 aa17.62■□□□□ 0.41
USHBP1-205ENST00000595993 USO1O60763 962 aaKnown RBP17.62■□□□□ 0.41
USHBP1-205ENST00000595993 C1RP00736 705 aa17.62■□□□□ 0.41
USHBP1-205ENST00000595993 KLRC2P26717 231 aa17.62■□□□□ 0.41
USHBP1-205ENST00000595993 MARCKSP29966 332 aaPredicted RBP17.62■□□□□ 0.41
USHBP1-205ENST00000595993 BECN1Q14457 450 aa17.62■□□□□ 0.41
USHBP1-205ENST00000595993 IFNLR1Q8IU57 520 aaPredicted RBP17.62■□□□□ 0.41
USHBP1-205ENST00000595993 CCDC43Q96MW1 224 aaKnown RBP17.62■□□□□ 0.41
USHBP1-205ENST00000595993 MTRQ99707 1265 aa17.62■□□□□ 0.41
USHBP1-205ENST00000595993 KCNK12Q9HB15 430 aa17.62■□□□□ 0.41
USHBP1-205ENST00000595993 RXFP1Q9HBX9 757 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms