RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 TMC7Q7Z402 723 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 DDX53Q86TM3 631 aaKnown RBP17.38■□□□□ 0.37
ZNF550-207ENST00000595560 RBM23Q86U06 439 aaKnown RBP17.38■□□□□ 0.37
ZNF550-207ENST00000595560 COLGALT2Q8IYK4 626 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 GSTCDQ8NEC7 633 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 RASSF8Q8NHQ8 419 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 BCL7CQ8WUZ0 217 aaPredicted RBP17.38■□□□□ 0.37
ZNF550-207ENST00000595560 SPIRE2Q8WWL2 714 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 USP28Q96RU2 1077 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 BLOC1S4Q9NUP1 217 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 STK39Q9UEW8 545 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 ODF2LQ9ULJ1 636 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 USP20Q9Y2K6 914 aa17.38■□□□□ 0.37
ZNF550-207ENST00000595560 TRIP11Q15643 1979 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 GLP2RO95838 553 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 NASPP49321 788 aaPredicted RBP17.37■□□□□ 0.37
ZNF550-207ENST00000595560 NDUFV1P49821 464 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 CEBPZQ03701 1054 aaKnown RBP17.37■□□□□ 0.37
ZNF550-207ENST00000595560 GRIK3Q13003 919 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 SMC1AQ14683 1233 aaKnown RBP17.37■□□□□ 0.37
ZNF550-207ENST00000595560 SLC39A14Q15043 492 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 ARSHQ5FYA8 562 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 NT5DC1Q5TFE4 455 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 EEF1DP3Q658K8 133 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 TAS1R3Q7RTX0 852 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 APBB1IPQ7Z5R6 666 aaPredicted RBP17.37■□□□□ 0.37
ZNF550-207ENST00000595560 GPBP1Q86WP2 473 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 RAD54LQ92698 747 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 ZBP1Q9H171 429 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 PARP2Q9UGN5 583 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 TNFSF13BQ9Y275 285 aa17.37■□□□□ 0.37
ZNF550-207ENST00000595560 GRXCR2A6NFK2 248 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 C2orf71A6NGG8 1288 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 SFI1A8K8P3 1242 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 HIDE1A8MVS5 230 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 TNFRSF10AO00220 468 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 NRP1O14786 923 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 PER2O15055 1255 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 SLC16A4O15374 487 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 ALDH2P05091 517 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 SMTNP53814 917 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 BMS1Q14692 1282 aaKnown RBP17.36■□□□□ 0.37
ZNF550-207ENST00000595560 USP49Q70CQ1 688 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 VPS52Q8N1B4 723 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 MRPL43Q8N983 215 aaKnown RBP17.36■□□□□ 0.37
ZNF550-207ENST00000595560 LARP4BQ92615 738 aaKnown RBP17.36■□□□□ 0.37
ZNF550-207ENST00000595560 EPSTI1Q96J88 318 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 MSLNLQ96KJ4 702 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 NECAB3Q96P71 396 aaPredicted RBP17.36■□□□□ 0.37
ZNF550-207ENST00000595560 RPS6KC1Q96S38 1066 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 VN1R3Q9BXE9 311 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 MRPL4Q9BYD3 311 aaKnown RBP17.36■□□□□ 0.37
ZNF550-207ENST00000595560 MIOSQ9NXC5 875 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 LARSQ9P2J5 1176 aaKnown RBP17.36■□□□□ 0.37
ZNF550-207ENST00000595560 FAM50BQ9Y247 325 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 FAN1Q9Y2M0 1017 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 IRAK3Q9Y616 596 aa17.36■□□□□ 0.37
ZNF550-207ENST00000595560 CITO14578 2027 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 NPHP3-ACAD11A0A0J9YXS1 232 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 RECQL4O94761 1208 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 CTSAP10619 480 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 TXLNAP40222 546 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 KCNC3Q14003 757 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 MCM6Q14566 821 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 SPECC1Q5M775 1068 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 KRI1Q8N9T8 703 aaKnown RBP17.35■□□□□ 0.37
ZNF550-207ENST00000595560 TMEM161BQ8NDZ6 487 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 VN1R2Q8NFZ6 395 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 KCNN1Q92952 543 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 CLIC6Q96NY7 704 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 ACO2Q99798 780 aaKnown RBP17.35■□□□□ 0.37
ZNF550-207ENST00000595560 REEP2Q9BRK0 252 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 PTPRHQ9HD43 1115 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 MARCH5Q9NX47 278 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 SNTG2Q9NY99 539 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 KLK14Q9P0G3 267 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 CLEC1BQ9P126 229 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 STK17AQ9UEE5 414 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 CD207Q9UJ71 328 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 C5orf42Q9H799 3197 aa17.35■□□□□ 0.37
ZNF550-207ENST00000595560 H0YCG3 227 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 NR1I2O75469 434 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 SRGAP2BP0DMP2 458 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 ZSCAN22P10073 491 aaPredicted RBP17.34■□□□□ 0.37
ZNF550-207ENST00000595560 MAPTP10636 758 aaKnown RBP17.34■□□□□ 0.37
ZNF550-207ENST00000595560 IL9P15248 144 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 OR1G1P47890 313 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 ZNF131P52739 623 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 CACNB1Q02641 598 aaPredicted RBP17.34■□□□□ 0.37
ZNF550-207ENST00000595560 COASYQ13057 564 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 SMAD4Q13485 552 aaKnown RBP17.34■□□□□ 0.37
ZNF550-207ENST00000595560 GIT2Q14161 759 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 ZNF568Q3ZCX4 644 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 TMEM184AQ6ZMB5 413 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 LINC00301Q8NCQ3 95 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 SMRP1Q8NCR6 262 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 ZNF396Q96N95 335 aaPredicted RBP17.34■□□□□ 0.37
ZNF550-207ENST00000595560 CDT1Q9H211 546 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 CCDC39Q9UFE4 941 aa17.34■□□□□ 0.37
ZNF550-207ENST00000595560 BARX2Q9UMQ3 279 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms