RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 DDIT3P35638 169 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 SCNN1GP51170 649 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 KCNQ1P51787 676 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 NCKAP1LP55160 1127 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 DNM1Q05193 864 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 RNASELQ05823 741 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 DSC1Q08554 894 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 CTC1Q2NKJ3 1217 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 AXDND1Q5T1B0 1012 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 ATF7IP2Q5U623 682 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 URGCPQ8TCY9 931 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 ASB2Q96Q27 587 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 FIZ1Q96SL8 496 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 ACO2Q99798 780 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 TARS2Q9BW92 718 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 GBP3Q9H0R5 595 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 UBE2ZQ9H832 354 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 SPG21Q9NZD8 308 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 KLK14Q9P0G3 267 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 STK17AQ9UEE5 414 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 COG5Q9UP83 839 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 TNFSF13BQ9Y275 285 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 GIT1Q9Y2X7 761 aa12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 RBM19Q9Y4C8 960 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 MTCL1Q9Y4B5 1905 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-206ENST00000595523 F8W810 466 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 LINC01565O15544 149 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 RECQL4O94761 1208 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 PROZP22891 400 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 LTBRP36941 435 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 ALDH7A1P49419 539 aaKnown RBP12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 MRPS5P82675 430 aaKnown RBP12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 E2F4Q16254 413 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 RRAGBQ5VZM2 374 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 SHC4Q6S5L8 630 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 CEP120Q8N960 986 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 KCNN1Q92952 543 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 PABPC5Q96DU9 382 aaKnown RBP12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 IGSF21Q96ID5 467 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 MRPL4Q9BYD3 311 aaKnown RBP12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 PANK2Q9BZ23 570 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 CDT1Q9H211 546 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 MARCH5Q9NX47 278 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 SNTG2Q9NY99 539 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 KANSL3Q9P2N6 904 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 DAXXQ9UER7 740 aaPredicted RBP12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 CCDC39Q9UFE4 941 aa12.08□□□□□ -0.48
SHKBP1-206ENST00000595523 MYMKA6NI61 221 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 HIDE1A8MVS5 230 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 PTGESO14684 152 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 MEFVO15553 781 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 TBX10O75333 385 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 GLP2RO95838 553 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 EFEMP2O95967 443 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 BMP1P13497 986 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 KCNA5P22460 613 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 TXLNAP40222 546 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 NRIP1P48552 1158 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 DLX2Q07687 328 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 NAB2Q15742 525 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 TMEM132AQ24JP5 1023 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 DCAF4L1Q3SXM0 396 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 TJAP1Q5JTD0 557 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 PLPP4Q5VZY2 271 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 PDILTQ8N807 584 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 DNAJC19Q96DA6 116 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 ZBTB45Q96K62 511 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 TCF25Q9BQ70 676 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 ADPGKQ9BRR6 497 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 TMEM175Q9BSA9 504 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 COL25A1Q9BXS0 654 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 HAPLN2Q9GZV7 340 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 PARVGQ9HBI0 331 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 LARSQ9P2J5 1176 aaKnown RBP12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 PARP2Q9UGN5 583 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 PCDHA7Q9UN72 937 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 C2orf16Q68DN1 1984 aa12.07□□□□□ -0.48
SHKBP1-206ENST00000595523 H3BQ06 376 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 NRP1O14786 923 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 PER2O15055 1255 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 CUTAO60888 179 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 FAM13AO94988 1023 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 KRT18P05783 430 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 STAT6P42226 847 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 SMTNP53814 917 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 KRT17Q04695 432 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 GRIK3Q13003 919 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 ADAM15Q13444 863 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 ZNF568Q3ZCX4 644 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 ATL3Q6DD88 541 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 CCDC73Q6ZRK6 1079 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 DYMQ7RTS9 669 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 HAUS6Q7Z4H7 955 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 DDX53Q86TM3 631 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 RBM23Q86U06 439 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 HACE1Q8IYU2 909 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 MYCT1Q8N699 235 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms