RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 MRPL4Q9BYD3 311 aaKnown RBP19.09■□□□□ 0.65
IRF3-208ENST00000594387 KLK14Q9P0G3 267 aa19.09■□□□□ 0.65
IRF3-208ENST00000594387 MTMR6Q9Y217 621 aa19.09■□□□□ 0.65
IRF3-208ENST00000594387 SSX2IPQ9Y2D8 614 aa19.09■□□□□ 0.65
IRF3-208ENST00000594387 PCDHGC5Q9Y5F6 944 aa19.09■□□□□ 0.65
IRF3-208ENST00000594387 SFI1A8K8P3 1242 aa19.08■□□□□ 0.64
IRF3-208ENST00000594387 NRP1O14786 923 aa19.08■□□□□ 0.64
IRF3-208ENST00000594387 INPPL1O15357 1258 aa19.08■□□□□ 0.64
IRF3-208ENST00000594387 PLS3P13797 630 aa19.08■□□□□ 0.64
IRF3-208ENST00000594387 SSTR3P32745 418 aaPredicted RBP19.08■□□□□ 0.64
IRF3-208ENST00000594387 YARSP54577 528 aaKnown RBP19.08■□□□□ 0.64
IRF3-208ENST00000594387 GRIK3Q13003 919 aa19.08■□□□□ 0.64
IRF3-208ENST00000594387 GPBP1Q86WP2 473 aa19.08■□□□□ 0.64
IRF3-208ENST00000594387 MRPL43Q8N983 215 aaKnown RBP19.08■□□□□ 0.64
IRF3-208ENST00000594387 ZFP42Q96MM3 310 aa19.08■□□□□ 0.64
IRF3-208ENST00000594387 NECAB3Q96P71 396 aaPredicted RBP19.08■□□□□ 0.64
IRF3-208ENST00000594387 CCSER1Q9C0I3 900 aa19.08■□□□□ 0.64
IRF3-208ENST00000594387 ODF2LQ9ULJ1 636 aa19.08■□□□□ 0.64
IRF3-208ENST00000594387 SRPRBQ9Y5M8 271 aaKnown RBP19.08■□□□□ 0.64
IRF3-208ENST00000594387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.07■□□□□ 0.64
IRF3-208ENST00000594387 SLC16A4O15374 487 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 FAM13AO94988 1023 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 CTSAP10619 480 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 IL9P15248 144 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 AFF1P51825 1210 aaKnown RBP19.07■□□□□ 0.64
IRF3-208ENST00000594387 SLC12A3P55017 1021 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 DLX2Q07687 328 aaPredicted RBP19.07■□□□□ 0.64
IRF3-208ENST00000594387 SMAD4Q13485 552 aaKnown RBP19.07■□□□□ 0.64
IRF3-208ENST00000594387 KARSQ15046 597 aaKnown RBP19.07■□□□□ 0.64
IRF3-208ENST00000594387 STK38Q15208 465 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 FAM173BQ6P4H8 233 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 COLGALT2Q8IYK4 626 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 SPIRE2Q8WWL2 714 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 CASP10Q92851 521 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 NTPCRQ9BSD7 190 aaKnown RBP19.07■□□□□ 0.64
IRF3-208ENST00000594387 CCDC94Q9BW85 323 aaPredicted RBP19.07■□□□□ 0.64
IRF3-208ENST00000594387 EMILIN2Q9BXX0 1053 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 SNTG2Q9NY99 539 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 PRKAG3Q9UGI9 489 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 TNFSF13BQ9Y275 285 aa19.07■□□□□ 0.64
IRF3-208ENST00000594387 PRG3Q9Y2Y8 225 aaPredicted RBP19.07■□□□□ 0.64
IRF3-208ENST00000594387 C2orf71A6NGG8 1288 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 HIDE1A8MVS5 230 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 MBTPS2O43462 519 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 TBX10O75333 385 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 TBCAO75347 108 aaKnown RBP19.06■□□□□ 0.64
IRF3-208ENST00000594387 THP07101 528 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 PLCG1P19174 1290 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 SCP2P22307 547 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 COASYQ13057 564 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 PTPAQ15257 358 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 NT5DC1Q5TFE4 455 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 KIAA1841Q6NSI8 718 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 LLGL2Q6P1M3 1020 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 PPFIBP1Q86W92 1011 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 FAM178BQ8IXR5 827 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 DAW1Q8N136 415 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 MYCT1Q8N699 235 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 LARP4BQ92615 738 aaKnown RBP19.06■□□□□ 0.64
IRF3-208ENST00000594387 RAD54LQ92698 747 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 POP1Q99575 1024 aaKnown RBP19.06■□□□□ 0.64
IRF3-208ENST00000594387 ZBP1Q9H171 429 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 ZHX3Q9H4I2 956 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 MRPL17Q9NRX2 175 aaKnown RBP19.06■□□□□ 0.64
IRF3-208ENST00000594387 TOPORSQ9NS56 1045 aaPredicted RBP19.06■□□□□ 0.64
IRF3-208ENST00000594387 MIOSQ9NXC5 875 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 ARHGAP28Q9P2N2 729 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 BARX2Q9UMQ3 279 aaPredicted RBP19.06■□□□□ 0.64
IRF3-208ENST00000594387 GDAQ9Y2T3 454 aa19.06■□□□□ 0.64
IRF3-208ENST00000594387 EYSQ5T1H1 3165 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 SPDYE4A6NLX3 237 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 TTLL13PA6NNM8 815 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 URODP06132 367 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 ABCD1P33897 745 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 DDIT3P35638 169 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 MATR3P43243 847 aaKnown RBP eCLIP19.05■□□□□ 0.64
IRF3-208ENST00000594387 GRIN1Q05586 938 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 MAPK7Q13164 816 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 MCM6Q14566 821 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 SLC39A14Q15043 492 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 ZNF568Q3ZCX4 644 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 RRAGBQ5VZM2 374 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 TMEM173Q86WV6 379 aaPredicted RBP19.05■□□□□ 0.64
IRF3-208ENST00000594387 KRI1Q8N9T8 703 aaKnown RBP19.05■□□□□ 0.64
IRF3-208ENST00000594387 BICD1Q96G01 975 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 ACO2Q99798 780 aaKnown RBP19.05■□□□□ 0.64
IRF3-208ENST00000594387 USP20Q9Y2K6 914 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 IRAK3Q9Y616 596 aa19.05■□□□□ 0.64
IRF3-208ENST00000594387 MTCL1Q9Y4B5 1905 aaKnown RBP19.04■□□□□ 0.64
IRF3-208ENST00000594387 TADA2AO75478 443 aa19.04■□□□□ 0.64
IRF3-208ENST00000594387 RECQL4O94761 1208 aa19.04■□□□□ 0.64
IRF3-208ENST00000594387 HOXB8P17481 243 aaPredicted RBP19.04■□□□□ 0.64
IRF3-208ENST00000594387 DSC1Q08554 894 aa19.04■□□□□ 0.64
IRF3-208ENST00000594387 TUSC3Q13454 348 aa19.04■□□□□ 0.64
IRF3-208ENST00000594387 SMAD2Q15796 467 aaKnown RBP19.04■□□□□ 0.64
IRF3-208ENST00000594387 TPRNQ4KMQ1 711 aa19.04■□□□□ 0.64
IRF3-208ENST00000594387 SPECC1Q5M775 1068 aa19.04■□□□□ 0.64
IRF3-208ENST00000594387 EEF1DP3Q658K8 133 aa19.04■□□□□ 0.64
IRF3-208ENST00000594387 TMEM184AQ6ZMB5 413 aa19.04■□□□□ 0.64
IRF3-208ENST00000594387 CCDC73Q6ZRK6 1079 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms