RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ATF7IP2Q5U623 682 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 CRELD2Q6UXH1 353 aaPredicted RBP22.62■■□□□ 1.21
PNKP-203ENST00000593946 RNF180Q86T96 592 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 SCLT1Q96NL6 688 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 ABHD10Q9NUJ1 306 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 CNTNAP2Q9UHC6 1331 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 NRDCO43847 1150 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 FAM189A1O60320 539 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 CSDE1O75534 798 aaKnown RBP22.62■■□□□ 1.21
PNKP-203ENST00000593946 MSNP26038 577 aaKnown RBP22.62■■□□□ 1.21
PNKP-203ENST00000593946 MATR3P43243 847 aaKnown RBP eCLIP22.62■■□□□ 1.21
PNKP-203ENST00000593946 LHX8Q68G74 356 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 DPY19L2P1Q6NXN4 242 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 MPZL3Q6UWV2 235 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 GBP6Q6ZN66 633 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 SESTD1Q86VW0 696 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 NEK11Q8NG66 645 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 DNAJB3Q8WWF6 145 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 DNAJC7Q99615 494 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 LSM14BQ9BX40 385 aaKnown RBP22.62■■□□□ 1.21
PNKP-203ENST00000593946 PLCB1Q9NQ66 1216 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 AGPAT5Q9NUQ2 364 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 TNFSF13BQ9Y275 285 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 NOL4O94818 638 aa22.61■■□□□ 1.21
PNKP-203ENST00000593946 FECHP22830 423 aa22.61■■□□□ 1.21
PNKP-203ENST00000593946 PON1P27169 355 aa22.61■■□□□ 1.21
PNKP-203ENST00000593946 C1QTNF8P60827 252 aa22.61■■□□□ 1.21
PNKP-203ENST00000593946 ZBED6P86452 979 aa22.61■■□□□ 1.21
PNKP-203ENST00000593946 PPP3CAQ08209 521 aa22.61■■□□□ 1.21
PNKP-203ENST00000593946 BAG1Q99933 345 aaPredicted RBP22.61■■□□□ 1.21
PNKP-203ENST00000593946 EDEM3Q9BZQ6 932 aa22.61■■□□□ 1.21
PNKP-203ENST00000593946 GCNT4Q9P109 453 aa22.61■■□□□ 1.21
PNKP-203ENST00000593946 N4BP1O75113 896 aaKnown RBP22.6■■□□□ 1.21
PNKP-203ENST00000593946 MYCNP04198 464 aaPredicted RBP22.6■■□□□ 1.21
PNKP-203ENST00000593946 ACOT2P49753 483 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 TMEM62Q0P6H9 643 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 NOLC1Q14978 699 aaKnown RBP eCLIP22.6■■□□□ 1.21
PNKP-203ENST00000593946 TAF2Q6P1X5 1199 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 USP37Q86T82 979 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 ZNF710Q8N1W2 664 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 KIAA1524Q8TCG1 905 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 TCHPQ9BT92 498 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 GRIN2DO15399 1336 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 LRRIQ3A6PVS8 624 aaPredicted RBP22.6■■□□□ 1.21
PNKP-203ENST00000593946 OGTO15294 1046 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 PMM2O15305 246 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 P4HA2O15460 535 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 STX10O60499 249 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 SLC9A1P19634 815 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 MYL7Q01449 175 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 PSMD6Q15008 389 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 ZBTB41Q5SVQ8 909 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 GDF6Q6KF10 455 aaPredicted RBP22.6■■□□□ 1.21
PNKP-203ENST00000593946 NME8Q8N427 588 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 OR8K1Q8NGG5 319 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 CCDC127Q96BQ5 260 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 GCOM2Q9BZD3 368 aaPredicted RBP22.6■■□□□ 1.21
PNKP-203ENST00000593946 GANQ9H2C0 597 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 CEP72Q9P209 647 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 PTPN22Q9Y2R2 807 aa22.6■■□□□ 1.21
PNKP-203ENST00000593946 CABYRO75952 493 aa22.59■■□□□ 1.21
PNKP-203ENST00000593946 ZNF568Q3ZCX4 644 aa22.59■■□□□ 1.21
PNKP-203ENST00000593946 EEF1DP3Q658K8 133 aa22.59■■□□□ 1.21
PNKP-203ENST00000593946 ZBTB33Q86T24 672 aa22.59■■□□□ 1.21
PNKP-203ENST00000593946 ZNF397Q8NF99 534 aaPredicted RBP22.59■■□□□ 1.21
PNKP-203ENST00000593946 SH3TC2Q8TF17 1288 aa22.59■■□□□ 1.21
PNKP-203ENST00000593946 NAA15Q9BXJ9 866 aaKnown RBP22.59■■□□□ 1.21
PNKP-203ENST00000593946 CDHR5Q9HBB8 845 aa22.59■■□□□ 1.21
PNKP-203ENST00000593946 TSPAN1O60635 241 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 HARSP12081 509 aaKnown RBP22.58■■□□□ 1.21
PNKP-203ENST00000593946 ARF4P18085 180 aaPredicted RBP22.58■■□□□ 1.21
PNKP-203ENST00000593946 GCLMP48507 274 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 ACLYP53396 1101 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 CLDN10P78369 228 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 APBA1Q02410 837 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 TMEM132AQ24JP5 1023 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 TRIM65Q6PJ69 517 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 BAP1Q92560 729 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 OSMRQ99650 979 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 TSEN34Q9BSV6 310 aaKnown RBP22.58■■□□□ 1.21
PNKP-203ENST00000593946 CDT1Q9H211 546 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 PDZD7Q9H5P4 517 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 SIX2Q9NPC8 291 aa22.58■■□□□ 1.21
PNKP-203ENST00000593946 RBAKQ9NYW8 714 aaPredicted RBP22.58■■□□□ 1.21
PNKP-203ENST00000593946 CITO14578 2027 aa22.58■■□□□ 1.2
PNKP-203ENST00000593946 MOXD2PA6NHM9 499 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 ERLIN2O94905 339 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 ACTN1P12814 892 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 DARSP14868 501 aaKnown RBP22.57■■□□□ 1.2
PNKP-203ENST00000593946 GTF2H1P32780 548 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 KCNJ6P48051 423 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 MXI1P50539 228 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 PCBP1Q15365 356 aaKnown RBP eCLIP22.57■■□□□ 1.2
PNKP-203ENST00000593946 FAM47CQ5HY64 1035 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 POP1Q99575 1024 aaKnown RBP22.57■■□□□ 1.2
PNKP-203ENST00000593946 TMEM117Q9H0C3 514 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.57■■□□□ 1.2
PNKP-203ENST00000593946 FBXL5Q9UKA1 691 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 GINS2Q9Y248 185 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 ARHGAP6O43182 974 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms