RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 CCINQ13939 588 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 HNRNPDQ14103 355 aaKnown RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 KARSQ15046 597 aaKnown RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 SLC5A9Q2M3M2 681 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 UVSSAQ2YD98 709 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 DGKKQ5KSL6 1271 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 SLC9C2Q5TAH2 1124 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 RCSD1Q6JBY9 416 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 PDXDC1Q6P996 788 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 VITQ6UXI7 678 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 KIAA1549LQ6ZVL6 1849 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 CYFIP1Q7L576 1253 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 TICAM1Q8IUC6 712 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 ANKHD1Q8IWZ3 2542 aaKnown RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 FAM26EQ8N5C1 309 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 FRMD1Q8N878 549 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 SNIP1Q8TAD8 396 aaKnown RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 TSC1Q92574 1164 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 LPPQ93052 612 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 ELSPBP1Q96BH3 223 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 NXPE2Q96DL1 559 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 B3GALT6Q96L58 329 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 RPS6KC1Q96S38 1066 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 TRMT61BQ9BVS5 477 aaKnown RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 PRDM16Q9HAZ2 1276 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 PXMP2Q9NR77 195 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 SEPT3Q9UH03 358 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 ZNF215Q9UL58 517 aaPredicted RBP3.57□□□□□ -1.84
VRK3-204ENST00000593912 INPP5FQ9Y2H2 1132 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 AK5Q9Y6K8 562 aa3.57□□□□□ -1.84
VRK3-204ENST00000593912 MYH6P13533 1939 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 ZBED9Q6R2W3 1325 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 KDM3AQ9Y4C1 1321 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 LOC100996750A0A140TA64 210 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 MEIS3P2A8K0S8 358 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 F8W810 466 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 SPECC1L-ADORA2AF8WAN1 911 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 ARNTLO00327 626 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 SRGAP3O43295 1099 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 CBFA2T3O75081 653 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 ATP9AO75110 1047 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 GJB3O75712 270 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 DKK1O94907 266 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 C7P10643 843 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 INSRRP14616 1297 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 HOXB4P17483 251 aaPredicted RBP3.56□□□□□ -1.84
VRK3-204ENST00000593912 ITPKAP23677 461 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 CTHP32929 405 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 VIPR2P41587 438 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 KPNA1P52294 538 aaPredicted RBP3.56□□□□□ -1.84
VRK3-204ENST00000593912 TMPRSS3P57727 454 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 PLCB4Q15147 1175 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 PREPLQ4J6C6 727 aaPredicted RBP3.56□□□□□ -1.84
VRK3-204ENST00000593912 PABPC1LQ4VXU2 614 aaKnown RBP3.56□□□□□ -1.84
VRK3-204ENST00000593912 TNNI3KQ59H18 835 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 FAM78AQ5JUQ0 283 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 LILRA6Q6PI73 481 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 SLC23A3Q6PIS1 610 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 ELMSAN1Q6PJG2 1045 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 DHRS13Q6UX07 377 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 AMOTL1Q8IY63 956 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 GALNT15Q8N3T1 639 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 DAGLBQ8NCG7 672 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 IRF7Q92985 503 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 IWS1Q96ST2 819 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 LGMNQ99538 433 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 OSMRQ99650 979 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 LPIN3Q9BQK8 851 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 KRTAP3-3Q9BYR6 98 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 KRTAP3-2Q9BYR7 98 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 CPVLQ9H3G5 476 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 PLEKHA4Q9H4M7 779 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 ATP8A2Q9NTI2 1148 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 TBC1D13Q9NVG8 400 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 DNAAF2Q9NVR5 837 aaKnown RBP3.56□□□□□ -1.84
VRK3-204ENST00000593912 KIAA1522Q9P206 1035 aaPredicted RBP3.56□□□□□ -1.84
VRK3-204ENST00000593912 DNMT3BQ9UBC3 853 aaKnown RBP3.56□□□□□ -1.84
VRK3-204ENST00000593912 DBNLQ9UJU6 430 aaKnown RBP3.56□□□□□ -1.84
VRK3-204ENST00000593912 PCOLCE2Q9UKZ9 415 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 MRPS23Q9Y3D9 190 aaKnown RBP3.56□□□□□ -1.84
VRK3-204ENST00000593912 PCDHB15Q9Y5E8 787 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 FPGT-TNNI3KV9GXZ4 949 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 HIVEP3Q5T1R4 2406 aa3.56□□□□□ -1.84
VRK3-204ENST00000593912 KNTC1P50748 2209 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 MYBPHLA2RUH7 354 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 MINDY4BA8MYZ0 360 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 ZNF263O14978 683 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 GPR182O15218 404 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 BRINP1O60477 761 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 NMT2O60551 498 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 RNF40O75150 1001 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 DDHD2O94830 711 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 SOD2P04179 222 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 C8BP07358 591 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 RNF224P0DH78 156 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 SKIP12755 728 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 PSMC3P17980 439 aa3.55□□□□□ -1.84
VRK3-204ENST00000593912 FGFR4P22455 802 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms