RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 LRRC19Q9H756 370 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 KCNH7Q9NS40 1196 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 MTUS1Q9ULD2 1270 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 GOLGA6L7A0A1B0GV03 622 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 SGPL1O95470 568 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 RASA3Q14644 834 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 RDH13Q8NBN7 331 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 UBIAD1Q9Y5Z9 338 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 RIPK2O43353 540 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 ICAM1P05362 532 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 PYGMP11217 842 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 SLC29A2Q14542 456 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 ITIH4Q14624 930 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 PIGWQ7Z7B1 504 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 IPO4Q8TEX9 1081 aaKnown RBP12.47□□□□□ -0.41
ZNF540-210ENST00000592533 PSPC1Q8WXF1 523 aaKnown RBP12.47□□□□□ -0.41
ZNF540-210ENST00000592533 ZNF622Q969S3 477 aaKnown RBP eCLIP12.47□□□□□ -0.41
ZNF540-210ENST00000592533 ROPN1BQ9BZX4 212 aaPredicted RBP12.47□□□□□ -0.41
ZNF540-210ENST00000592533 PCIF1Q9H4Z3 704 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 ROPN1Q9HAT0 212 aaPredicted RBP12.47□□□□□ -0.41
ZNF540-210ENST00000592533 AGO4Q9HCK5 861 aaKnown RBP12.47□□□□□ -0.41
ZNF540-210ENST00000592533 PASKQ96RG2 1323 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 TISP43B9A030 160 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 DNM1LO00429 736 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 CHN1P15882 459 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 QARSP47897 775 aaKnown RBP12.47□□□□□ -0.41
ZNF540-210ENST00000592533 GPC3P51654 580 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 MFAP3P55082 362 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 TNIP1Q15025 636 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 PCNX4Q63HM2 1172 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 HAUS6Q7Z4H7 955 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 ZNF564Q8TBZ8 553 aaPredicted RBP12.47□□□□□ -0.41
ZNF540-210ENST00000592533 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 KLC4Q9NSK0 619 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 SIP14410 1827 aa12.47□□□□□ -0.41
ZNF540-210ENST00000592533 CTNND1O60716 968 aaKnown RBP12.46□□□□□ -0.41
ZNF540-210ENST00000592533 DNAJC8O75937 253 aaPredicted RBP12.46□□□□□ -0.41
ZNF540-210ENST00000592533 ADRB2P07550 413 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 CDR2Q01850 454 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 XRCC4Q13426 336 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 MESDQ14696 234 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 FKBP1CQ5VVH2 108 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 TRMT10CQ7L0Y3 403 aaKnown RBP12.46□□□□□ -0.41
ZNF540-210ENST00000592533 CPLX4Q7Z7G2 160 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 SAMD3Q8N6K7 520 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 MDM1Q8TC05 714 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 KAT5Q92993 513 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 NUP85Q9BW27 656 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 SEMA4AQ9H3S1 761 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 SLC40A1Q9NP59 571 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 TMOD2Q9NZR1 351 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 WHRNQ9P202 907 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 PHF20L1A8MW92 1017 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 FSCN2O14926 492 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 RGS16O15492 202 aaPredicted RBP12.46□□□□□ -0.41
ZNF540-210ENST00000592533 MMEP08473 750 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 GTF2H1P32780 548 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 AOC3Q16853 763 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 KCTD19Q17RG1 926 aaPredicted RBP12.46□□□□□ -0.41
ZNF540-210ENST00000592533 SPRED3Q2MJR0 410 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 TKFCQ3LXA3 575 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 MEX3CQ5U5Q3 659 aaKnown RBP12.46□□□□□ -0.41
ZNF540-210ENST00000592533 C4orf19Q8IY42 314 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 HELQQ8TDG4 1101 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 DDX1Q92499 740 aaKnown RBP12.46□□□□□ -0.41
ZNF540-210ENST00000592533 AZI2Q9H6S1 392 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 MAP3K20Q9NYL2 800 aaKnown RBP12.46□□□□□ -0.41
ZNF540-210ENST00000592533 COL20A1Q9P218 1284 aa12.46□□□□□ -0.41
ZNF540-210ENST00000592533 YDJCA8MPS7 323 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 TP73O15350 636 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 GSTA1P08263 222 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 RARAP10276 462 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 SCTRP47872 440 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 RWDD2BP57060 319 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 ZNF746Q6NUN9 644 aaPredicted RBP12.46□□□□□ -0.42
ZNF540-210ENST00000592533 SLC47A2Q86VL8 602 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 MAGEC3Q8TD91 643 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 TMC2Q8TDI7 906 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 CLEC4DQ8WXI8 215 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 FBXL18Q96ME1 805 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 TMEM8AQ9HCN3 771 aa12.46□□□□□ -0.42
ZNF540-210ENST00000592533 H0YIN7 160 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 GRIN3BO60391 1043 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 CYP11B1P15538 503 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 CAP2P40123 477 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 SPP2Q13103 211 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 KRT39Q6A163 491 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 RHBDF2Q6PJF5 856 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 SYDE1Q6ZW31 735 aaPredicted RBP12.45□□□□□ -0.42
ZNF540-210ENST00000592533 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 ZSWIM2Q8NEG5 633 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 TBC1D22BQ9NU19 505 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 EXOC7Q9UPT5 735 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 KIAA1217Q5T5P2 1943 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 ASTN2O75129 1339 aaPredicted RBP12.45□□□□□ -0.42
ZNF540-210ENST00000592533 TCRBV7S2A1N4TA0A589 114 aa12.45□□□□□ -0.42
ZNF540-210ENST00000592533 CYP26A1O43174 497 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms