RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
SDF2-209ENST00000591903 UBXN2BQ14CS0 331 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 SAFBQ15424 915 aaKnown RBP eCLIP11.42□□□□□ -0.58
SDF2-209ENST00000591903 MLF2Q15773 248 aaPredicted RBP11.42□□□□□ -0.58
SDF2-209ENST00000591903 ZBTB41Q5SVQ8 909 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 TYW1BQ6NUM6 668 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 TRMT1LQ7Z2T5 733 aaKnown RBP11.42□□□□□ -0.58
SDF2-209ENST00000591903 PLA2G4DQ86XP0 818 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 REXO1Q8N1G1 1221 aaKnown RBP11.42□□□□□ -0.58
SDF2-209ENST00000591903 LPPQ93052 612 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 ZNF707Q96C28 371 aaPredicted RBP11.42□□□□□ -0.58
SDF2-209ENST00000591903 C8orf76Q96K31 380 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 NT5C3AQ9H0P0 336 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 FOXP1Q9H334 677 aaPredicted RBP11.42□□□□□ -0.58
SDF2-209ENST00000591903 RXFP1Q9HBX9 757 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 ANGPTL2Q9UKU9 493 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 PCDHA4Q9UN74 947 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 DOCK6Q96HP0 2047 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 CNTNAP2Q9UHC6 1331 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 FAM170BA6NMN3 283 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 C2CD2LO14523 706 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 RFPL2O75678 378 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 OATP04181 439 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 GLUD2P49448 558 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 GPC5P78333 572 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 SNW1Q13573 536 aaKnown RBP11.41□□□□□ -0.58
SDF2-209ENST00000591903 COL9A2Q14055 689 aaPredicted RBP11.41□□□□□ -0.58
SDF2-209ENST00000591903 PPP2R5DQ14738 602 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 NPY5RQ15761 445 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 LAIR1Q6GTX8 287 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 ZNF280BQ86YH2 543 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 GPR65Q8IYL9 337 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 BLIDQ8IZY5 108 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 ZNF577Q9BSK1 485 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 PRKD2Q9BZL6 878 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 LTB4R2Q9NPC1 389 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 PRMT8Q9NR22 394 aaPredicted RBP11.41□□□□□ -0.58
SDF2-209ENST00000591903 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.41□□□□□ -0.58
SDF2-209ENST00000591903 VPS54Q9P1Q0 977 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 GABBR1Q9UBS5 961 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 PIN4Q9Y237 131 aaKnown RBP11.41□□□□□ -0.58
SDF2-209ENST00000591903 SAMM50Q9Y512 469 aa11.41□□□□□ -0.58
SDF2-209ENST00000591903 hCG_1642624A0A1W2PR95 340 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 NRP1O14786 923 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 DDHD2O94830 711 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 FSHRP23945 695 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 U2AF2P26368 475 aaKnown RBP eCLIP11.4□□□□□ -0.58
SDF2-209ENST00000591903 KRT2P35908 639 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 DNM2P50570 870 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 CREMQ03060 361 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 ORC2Q13416 577 aaPredicted RBP11.4□□□□□ -0.58
SDF2-209ENST00000591903 LONRF3Q496Y0 759 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 SLC44A4Q53GD3 710 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 MOXD1Q6UVY6 613 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 KRT25Q7Z3Z0 450 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 ZNF410Q86VK4 478 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 CELF5Q8N6W0 485 aaKnown RBP11.4□□□□□ -0.58
SDF2-209ENST00000591903 CLDN23Q96B33 292 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 PGBD1Q96JS3 809 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 ZNF668Q96K58 619 aaPredicted RBP11.4□□□□□ -0.58
SDF2-209ENST00000591903 NAP1L4Q99733 375 aaKnown RBP11.4□□□□□ -0.58
SDF2-209ENST00000591903 PARD6AQ9NPB6 346 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 CDH7Q9ULB5 785 aa11.4□□□□□ -0.58
SDF2-209ENST00000591903 MRPS17Q9Y2R5 130 aaKnown RBP11.4□□□□□ -0.58
SDF2-209ENST00000591903 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
SDF2-209ENST00000591903 IGLV3-22A0A075B6J6 115 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.39□□□□□ -0.59
SDF2-209ENST00000591903 MEIS3P2A8K0S8 358 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 WDR64B1ANS9 1081 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 FAM86B1E9PN63 330 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 GAS2O43903 313 aaKnown RBP11.39□□□□□ -0.59
SDF2-209ENST00000591903 B4GALT3O60512 393 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 RETP07949 1114 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 CYP3A4P08684 503 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 FAM86B2P0C5J1 330 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 TRAPPC10P48553 1259 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 USP11P51784 963 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 DSG1Q02413 1049 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 SPEM2Q0P670 501 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 ACAP1Q15027 740 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 LARP1BQ659C4 914 aaKnown RBP11.39□□□□□ -0.59
SDF2-209ENST00000591903 RNF168Q8IYW5 571 aaPredicted RBP11.39□□□□□ -0.59
SDF2-209ENST00000591903 CRYGNQ8WXF5 182 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 FGF14Q92915 247 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 TNFRSF25Q93038 417 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 IER2Q9BTL4 223 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 RSAD1Q9HA92 442 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 UBN1Q9NPG3 1134 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 MTF2Q9Y483 593 aaPredicted RBP11.39□□□□□ -0.59
SDF2-209ENST00000591903 PCDHB2Q9Y5E7 798 aa11.39□□□□□ -0.59
SDF2-209ENST00000591903 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.39□□□□□ -0.59
SDF2-209ENST00000591903 CNOT1A5YKK6 2376 aaKnown RBP11.38□□□□□ -0.59
SDF2-209ENST00000591903 A0A087WZ62 844 aa11.38□□□□□ -0.59
SDF2-209ENST00000591903 H3BQV1 296 aa11.38□□□□□ -0.59
SDF2-209ENST00000591903 TGM5O43548 720 aa11.38□□□□□ -0.59
SDF2-209ENST00000591903 NR1I2O75469 434 aa11.38□□□□□ -0.59
SDF2-209ENST00000591903 CSDE1O75534 798 aaKnown RBP11.38□□□□□ -0.59
SDF2-209ENST00000591903 EFEMP2O95967 443 aa11.38□□□□□ -0.59
SDF2-209ENST00000591903 GCFC2P16383 781 aaKnown RBP11.38□□□□□ -0.59
SDF2-209ENST00000591903 SHC2P98077 582 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms