RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 LRP5O75197 1615 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 KANSL1LA0AUZ9 987 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 SMIM23A6NLE4 172 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 LYNP07948 512 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 CALCRLQ16602 461 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 TMEM214Q6NUQ4 689 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 ZNF662Q6ZS27 426 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 FAM47EQ6ZV65 393 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 TMC4Q7Z404 712 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 LARP4BQ92615 738 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 NMD3Q96D46 503 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 SPATA17Q96L03 361 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 PIGSQ96S52 555 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 EYA3Q99504 573 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 ZHX3Q9H4I2 956 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 TMEM260Q9NX78 707 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 CICQ96RK0 1608 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 MROH7Q68CQ1 1323 aa13.07□□□□□ -0.32
SMARCA4-217ENST00000591595 DOCK2Q92608 1830 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 A0A1W2PQJ5 194 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 POTEMA6NI47 508 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 TRAF5O00463 557 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 COL6A2P12110 1019 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 CHN1P15882 459 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 HOXD10P28358 340 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 CCDC6Q16204 474 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 MARK2Q7KZI7 788 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 C11orf74Q86VG3 221 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 LRRC8CQ8TDW0 803 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 SNX29Q8TEQ0 813 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 CASKIN2Q8WXE0 1202 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 MS4A14Q96JA4 679 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 ZNF287Q9HBT7 754 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 FLT1P17948 1338 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 MYMKA6NI61 221 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 M0R2N6 131 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 KCNQ2O43526 872 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 SNX3O60493 162 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 EPS15P42566 896 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 TMED10P49755 219 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 CDK7P50613 346 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 OCRLQ01968 901 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 GSTA3Q16772 222 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 FIGNQ5HY92 759 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 KRT79Q5XKE5 535 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 CCSAPQ6IQ19 270 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 SCG3Q8WXD2 468 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 DYDC2Q96IM9 177 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 GPR101Q96P66 508 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 RAB34Q9BZG1 259 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 RASA1P20936 1047 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 TNNI2P48788 182 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 ARFIP2P53365 341 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 DCTN2Q13561 401 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 CLEC4GQ6UXB4 293 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 DAGLBQ8NCG7 672 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 FAM114A2Q9NRY5 505 aa13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 TMA7Q9Y2S6 64 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 USP15Q9Y4E8 981 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-217ENST00000591595 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 SLC1A4P43007 532 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 SERPINB8P50452 374 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 IGBP1P78318 339 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 KRT71Q3SY84 523 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 CFAP221Q4G0U5 840 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 ZSCAN29Q8IWY8 852 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 MAELQ96JY0 434 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 PURBQ96QR8 312 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 KANSL2Q9H9L4 492 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 TRIM64CA6NLI5 447 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 CCNB1P14635 433 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 HLTFQ14527 1009 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 UAP1Q16222 522 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 SNX30Q5VWJ9 437 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 CENPPQ6IPU0 288 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 FNDC8Q8TC99 324 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 STRCP1A6NGW2 1772 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 BCORQ6W2J9 1755 aa13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-217ENST00000591595 SUN1O94901 812 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 FTCDO95954 541 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 PABPC4LP0CB38 370 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 CCR3P51677 355 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 EMP3P54852 163 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 LMNB2Q03252 620 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 PARP6Q2NL67 630 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 UNC13DQ70J99 1090 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 ANKRD13BQ86YJ7 626 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 NELFCDQ8IXH7 590 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 PPFIBP2Q8ND30 876 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 FAM13CQ8NE31 585 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 LRRC45Q96CN5 670 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 GBA3Q9H227 469 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 TRPC7Q9HCX4 862 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 ANKRD36CQ5JPF3 1778 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 FBP2O00757 339 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 TTI1O43156 1089 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 LMNB1P20700 586 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms