RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 MCM2P49736 904 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 RBM25P49756 843 aaKnown RBP10.54□□□□□ -0.72
BRCA1-226ENST00000591534 EVCP57679 992 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 SH3BP2P78314 561 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 CCT2P78371 535 aaKnown RBP10.54□□□□□ -0.72
BRCA1-226ENST00000591534 TCF15Q12870 199 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 TOB2Q14106 344 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-226ENST00000591534 NONOQ15233 471 aaKnown RBP eCLIP10.54□□□□□ -0.72
BRCA1-226ENST00000591534 PCBP1Q15365 356 aaKnown RBP eCLIP10.54□□□□□ -0.72
BRCA1-226ENST00000591534 NTRK3Q16288 839 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 UGCGQ16739 394 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 KIAA1841Q6NSI8 718 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 OTUD6AQ7L8S5 288 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 OTOP3Q7RTS5 596 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 KRT25Q7Z3Z0 450 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 BLIDQ8IZY5 108 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 CNNM3Q8NE01 707 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 IGSF21Q96ID5 467 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 FAM20AQ96MK3 541 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 NLRP4Q96MN2 994 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 FDXACB1Q9BRP7 624 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-226ENST00000591534 ZBP1Q9H171 429 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 VRTNQ9H8Y1 702 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 SFXN1Q9H9B4 322 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 FAM105AQ9NUU6 356 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 DDX25Q9UHL0 483 aaKnown RBP10.54□□□□□ -0.72
BRCA1-226ENST00000591534 INPP5FQ9Y2H2 1132 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 CYP46A1Q9Y6A2 500 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 CNTNAP2Q9UHC6 1331 aa10.54□□□□□ -0.72
BRCA1-226ENST00000591534 CCDC194A0A1B0GVG4 234 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 NT5C1B-RDH14C9J2C7 533 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 ASAP2O43150 1006 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 GFRA3O60609 400 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 GALTP07902 379 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 GCFC2P16383 781 aaKnown RBP10.53□□□□□ -0.72
BRCA1-226ENST00000591534 KLRC2P26717 231 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 QARSP47897 775 aaKnown RBP10.53□□□□□ -0.72
BRCA1-226ENST00000591534 RARS2Q5T160 578 aaKnown RBP10.53□□□□□ -0.72
BRCA1-226ENST00000591534 RUFY3Q7L099 469 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 SRGAP1Q7Z6B7 1085 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 HACE1Q8IYU2 909 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 DAGLBQ8NCG7 672 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 TCP11Q8WWU5 503 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 PSPC1Q8WXF1 523 aaKnown RBP10.53□□□□□ -0.72
BRCA1-226ENST00000591534 ZNF274Q96GC6 653 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-226ENST00000591534 TBC1D32Q96NH3 1257 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 TMEM175Q9BSA9 504 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 POMKQ9H5K3 350 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 NCOA5Q9HCD5 579 aaKnown RBP10.53□□□□□ -0.72
BRCA1-226ENST00000591534 CYP26B1Q9NR63 512 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 MRPL17Q9NRX2 175 aaKnown RBP10.53□□□□□ -0.72
BRCA1-226ENST00000591534 TBC1D13Q9NVG8 400 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 COL4A3BPQ9Y5P4 624 aa10.53□□□□□ -0.72
BRCA1-226ENST00000591534 C2CD4DB7Z1M9 353 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 CSDE1O75534 798 aaKnown RBP10.52□□□□□ -0.73
BRCA1-226ENST00000591534 OFD1O75665 1012 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.73
BRCA1-226ENST00000591534 P4HBP07237 508 aaKnown RBP10.52□□□□□ -0.73
BRCA1-226ENST00000591534 CLCN5P51795 746 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 VCPP55072 806 aaKnown RBP10.52□□□□□ -0.73
BRCA1-226ENST00000591534 RABEP1Q15276 862 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 CYP26C1Q6V0L0 522 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 CCDC149Q6ZUS6 474 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 BPHLQ86WA6 291 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-226ENST00000591534 STAMQ92783 540 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 CEP170P1Q96L14 293 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 GBP3Q9H0R5 595 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 NRDE2Q9H7Z3 1164 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 RSAD1Q9HA92 442 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 AGPAT5Q9NUQ2 364 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 FAN1Q9Y2M0 1017 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 PCDHB2Q9Y5E7 798 aa10.52□□□□□ -0.73
BRCA1-226ENST00000591534 TECTAO75443 2155 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 TBX3O15119 743 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 ERLIN2O94905 339 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 TDP2O95551 362 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 BRD1O95696 1058 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 SRGAP2CP0DJJ0 459 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 AXLP30530 894 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 PPP2R5CQ13362 524 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 DRP2Q13474 957 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 MXD4Q14582 209 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-226ENST00000591534 LETM2Q2VYF4 491 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 PPP4R3AQ6IN85 833 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 B3GNT9Q6UX72 402 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 TMC5Q6UXY8 1006 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 C15orf39Q6ZRI6 1047 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 ANO5Q75V66 913 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 NEK8Q86SG6 692 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 SLFN12Q8IYM2 578 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 PLPP7Q8NBV4 271 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 ETNPPLQ8TBG4 499 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 SLC22A17Q8WUG5 538 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 LPPQ93052 612 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 CCDC51Q96ER9 411 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 MBOAT7Q96N66 472 aa10.51□□□□□ -0.73
BRCA1-226ENST00000591534 RBM19Q9Y4C8 960 aaKnown RBP10.51□□□□□ -0.73
BRCA1-226ENST00000591534 FNDC1Q4ZHG4 1894 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-226ENST00000591534 KIAA1671Q9BY89 1806 aa10.5□□□□□ -0.73
BRCA1-226ENST00000591534 H0Y858 1186 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms