RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 CDK7P50613 346 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 CCL23P55773 120 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 MLLT1Q03111 559 aaPredicted RBP7.1□□□□□ -1.27
VPS4B-205ENST00000591383 FAAP100Q0VG06 881 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 POU4F2Q12837 409 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 BFSP2Q13515 415 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 PDIA5Q14554 519 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 TAF2Q6P1X5 1199 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 MTHFD1LQ6UB35 978 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 MAEAQ7L5Y9 396 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 OTUD6AQ7L8S5 288 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 KCNK18Q7Z418 384 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 RSPH3Q86UC2 560 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 SERINC5Q86VE9 423 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 GPBP1Q86WP2 473 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 CYP4X1Q8N118 509 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 FSIP1Q8NA03 581 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 DNAJB3Q8WWF6 145 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 DHX58Q96C10 678 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 ZNF668Q96K58 619 aaPredicted RBP7.1□□□□□ -1.27
VPS4B-205ENST00000591383 PNMA5Q96PV4 448 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 NACC1Q96RE7 527 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 HSD17B14Q9BPX1 270 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 LBHD1Q9BQE6 289 aaPredicted RBP7.1□□□□□ -1.27
VPS4B-205ENST00000591383 NOC4LQ9BVI4 516 aaKnown RBP7.1□□□□□ -1.27
VPS4B-205ENST00000591383 BHMT2Q9H2M3 363 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 SUGCTQ9HAC7 445 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 POLMQ9NP87 494 aaPredicted RBP7.1□□□□□ -1.27
VPS4B-205ENST00000591383 CUEDC1Q9NWM3 386 aaPredicted RBP7.1□□□□□ -1.27
VPS4B-205ENST00000591383 TMEM63CQ9P1W3 806 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 CCDC39Q9UFE4 941 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 GGT7Q9UJ14 662 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 TBX21Q9UL17 535 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 PCDHA7Q9UN72 937 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 DNM3Q9UQ16 869 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 GINS2Q9Y248 185 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 NR2E3Q9Y5X4 410 aa7.1□□□□□ -1.27
VPS4B-205ENST00000591383 MORC2Q9Y6X9 1032 aaPredicted RBP7.1□□□□□ -1.27
VPS4B-205ENST00000591383 A0A087X0B3 334 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 MBLAC1A4D2B0 266 aaPredicted RBP7.09□□□□□ -1.27
VPS4B-205ENST00000591383 TRIM43BA6NCK2 446 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 RBAK-RBAKDNI3L0D1 243 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 TBCAO75347 108 aaKnown RBP7.09□□□□□ -1.27
VPS4B-205ENST00000591383 STBD1O95210 358 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 LYPLA2O95372 231 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 EYA4O95677 639 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 USP17L7P0C7H9 530 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 PLA2G4BP0C869 781 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 PFKFB1P16118 471 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 IBSPP21815 317 aaPredicted RBP7.09□□□□□ -1.27
VPS4B-205ENST00000591383 TMOD1P28289 359 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 DNM2P50570 870 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 MRPS6P82932 125 aaKnown RBP7.09□□□□□ -1.27
VPS4B-205ENST00000591383 ARID5AQ03989 594 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 KIZQ2M2Z5 673 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 MARCH8Q5T0T0 291 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 AXDND1Q5T1B0 1012 aaPredicted RBP7.09□□□□□ -1.27
VPS4B-205ENST00000591383 FAM102BQ5T8I3 360 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 RRAGBQ5VZM2 374 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 RESP18Q5W5W9 173 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 EFCAB12Q6NXP0 572 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 SHC4Q6S5L8 630 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 CCDC73Q6ZRK6 1079 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 LRRC8DQ7L1W4 858 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 CAGE1Q8TC20 777 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 MRPS27Q92552 414 aaKnown RBP7.09□□□□□ -1.27
VPS4B-205ENST00000591383 RAD54LQ92698 747 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 TMEM143Q96AN5 459 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 TRIM43Q96BQ3 446 aaPredicted RBP7.09□□□□□ -1.27
VPS4B-205ENST00000591383 SCLYQ96I15 445 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 NLRP4Q96MN2 994 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 TOX2Q96NM4 488 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 GBP4Q96PP9 640 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 CTAGE1Q96RT6 745 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 JPH2Q9BR39 696 aaPredicted RBP7.09□□□□□ -1.27
VPS4B-205ENST00000591383 RUSC1Q9BVN2 902 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 PANK2Q9BZ23 570 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 POLR3FQ9H1D9 316 aaPredicted RBP7.09□□□□□ -1.27
VPS4B-205ENST00000591383 WNT8AQ9H1J5 351 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 ANKEF1Q9NU02 776 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 TOR4AQ9NXH8 423 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 FAM8A1Q9UBU6 413 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 STK17AQ9UEE5 414 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 DBR1Q9UK59 544 aaKnown RBP7.09□□□□□ -1.27
VPS4B-205ENST00000591383 RCOR1Q9UKL0 485 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 CDY2AQ9Y6F7 541 aa7.09□□□□□ -1.27
VPS4B-205ENST00000591383 MICAL3Q7RTP6 2002 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 A0A1B0GVL5 298 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 SMIM35A0A1B0GVV1 85 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 LRRIQ4A6NIV6 560 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 H0YGN5 161 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 KIAA0355O15063 1070 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 MAGEB2O15479 319 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 SLC26A4O43511 780 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 GAS2O43903 313 aaKnown RBP7.08□□□□□ -1.28
VPS4B-205ENST00000591383 MAFO75444 373 aaPredicted RBP7.08□□□□□ -1.28
VPS4B-205ENST00000591383 DGAT1O75907 488 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 GHRP10912 638 aa7.08□□□□□ -1.28
VPS4B-205ENST00000591383 CKBP12277 381 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms