RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 FNIP2Q9P278 1114 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 FBXO4Q9UKT5 387 aa19.35■□□□□ 0.69
RETREG3-210ENST00000590541 ZMYND10O75800 440 aa19.34■□□□□ 0.69
RETREG3-210ENST00000590541 FSHRP23945 695 aa19.34■□□□□ 0.69
RETREG3-210ENST00000590541 LAMTOR4Q0VGL1 99 aa19.34■□□□□ 0.69
RETREG3-210ENST00000590541 GPR65Q8IYL9 337 aa19.34■□□□□ 0.69
RETREG3-210ENST00000590541 PSPC1Q8WXF1 523 aaKnown RBP19.34■□□□□ 0.69
RETREG3-210ENST00000590541 SLC7A3Q8WY07 619 aa19.34■□□□□ 0.69
RETREG3-210ENST00000590541 BORCS6Q96GS4 357 aa19.34■□□□□ 0.69
RETREG3-210ENST00000590541 ZFP42Q96MM3 310 aa19.34■□□□□ 0.69
RETREG3-210ENST00000590541 MBOAT7Q96N66 472 aa19.34■□□□□ 0.69
RETREG3-210ENST00000590541 DHX33Q9H6R0 707 aaKnown RBP19.34■□□□□ 0.69
RETREG3-210ENST00000590541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.34■□□□□ 0.69
RETREG3-210ENST00000590541 SPATA6Q9NWH7 488 aaPredicted RBP19.34■□□□□ 0.69
RETREG3-210ENST00000590541 NCDNQ9UBB6 729 aa19.34■□□□□ 0.69
RETREG3-210ENST00000590541 MTF2Q9Y483 593 aaPredicted RBP19.34■□□□□ 0.69
RETREG3-210ENST00000590541 HES2Q9Y543 173 aa19.34■□□□□ 0.69
RETREG3-210ENST00000590541 ZFP37Q9Y6Q3 630 aaPredicted RBP19.34■□□□□ 0.69
RETREG3-210ENST00000590541 KMT2BQ9UMN6 2715 aaPredicted RBP19.34■□□□□ 0.69
RETREG3-210ENST00000590541 MIA3Q5JRA6 1907 aa19.33■□□□□ 0.69
RETREG3-210ENST00000590541 MYH15Q9Y2K3 1946 aa19.33■□□□□ 0.69
RETREG3-210ENST00000590541 PATJQ8NI35 1801 aa19.33■□□□□ 0.69
RETREG3-210ENST00000590541 EML1O00423 815 aa19.33■□□□□ 0.68
RETREG3-210ENST00000590541 SPTLC1O15269 473 aa19.33■□□□□ 0.68
RETREG3-210ENST00000590541 IFNAR1P17181 557 aa19.33■□□□□ 0.68
RETREG3-210ENST00000590541 RPL17P18621 184 aaKnown RBP19.33■□□□□ 0.68
RETREG3-210ENST00000590541 PDIA3P30101 505 aaKnown RBP19.33■□□□□ 0.68
RETREG3-210ENST00000590541 ATXN1P54253 815 aaKnown RBP19.33■□□□□ 0.68
RETREG3-210ENST00000590541 FUT10Q6P4F1 479 aa19.33■□□□□ 0.68
RETREG3-210ENST00000590541 CEP170P1Q96L14 293 aa19.33■□□□□ 0.68
RETREG3-210ENST00000590541 SLC26A6Q9BXS9 759 aa19.33■□□□□ 0.68
RETREG3-210ENST00000590541 BCO2Q9BYV7 579 aa19.33■□□□□ 0.68
RETREG3-210ENST00000590541 BMP2KQ9NSY1 1161 aaPredicted RBP19.33■□□□□ 0.68
RETREG3-210ENST00000590541 WRAP73Q9P2S5 460 aaPredicted RBP19.33■□□□□ 0.68
RETREG3-210ENST00000590541 EPG5Q9HCE0 2579 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 LAMTOR5O43504 91 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 TSPAN1O60635 241 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 PRKCQQ04759 706 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 CSTF1Q05048 431 aaKnown RBP19.32■□□□□ 0.68
RETREG3-210ENST00000590541 MLF2Q15773 248 aaPredicted RBP19.32■□□□□ 0.68
RETREG3-210ENST00000590541 USP41Q3LFD5 358 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 GRASPQ7Z6J2 395 aaPredicted RBP19.32■□□□□ 0.68
RETREG3-210ENST00000590541 RNF149Q8NC42 400 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 GSTCDQ8NEC7 633 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 ZNF274Q96GC6 653 aaPredicted RBP19.32■□□□□ 0.68
RETREG3-210ENST00000590541 COLEC11Q9BWP8 271 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 SH3GLB2Q9NR46 395 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 CDH7Q9ULB5 785 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 PCDHGA2Q9Y5H1 932 aa19.32■□□□□ 0.68
RETREG3-210ENST00000590541 TDRD15B5MCY1 1934 aaKnown RBP19.31■□□□□ 0.68
RETREG3-210ENST00000590541 DOCK6Q96HP0 2047 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 NR1I2O75469 434 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 QARSP47897 775 aaKnown RBP19.31■□□□□ 0.68
RETREG3-210ENST00000590541 NLRP5P59047 1200 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 NTHL1P78549 312 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 SLC44A4Q53GD3 710 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 FERMT3Q86UX7 667 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 EXOC8Q8IYI6 725 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 GPR161Q8N6U8 529 aaKnown RBP19.31■□□□□ 0.68
RETREG3-210ENST00000590541 ZBTB44Q8NCP5 570 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 CPB2Q96IY4 423 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 C22orf23Q9BZE7 217 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 OSBPL6Q9BZF3 934 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 ADAM28Q9UKQ2 775 aa19.31■□□□□ 0.68
RETREG3-210ENST00000590541 FAM170BA6NMN3 283 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 M0R2N6 131 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 ERLIN2O94905 339 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 SDHBP21912 280 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 AXLP30530 894 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 RFC5P40937 340 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 TOB2Q14106 344 aaPredicted RBP19.3■□□□□ 0.68
RETREG3-210ENST00000590541 UBXN2BQ14CS0 331 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 CPLX2Q6PUV4 134 aaKnown RBP19.3■□□□□ 0.68
RETREG3-210ENST00000590541 MOXD1Q6UVY6 613 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 PRSS55Q6UWB4 352 aaPredicted RBP19.3■□□□□ 0.68
RETREG3-210ENST00000590541 TRIM22Q8IYM9 498 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 FAM177A1Q8N128 213 aaPredicted RBP19.3■□□□□ 0.68
RETREG3-210ENST00000590541 RABGGTAQ92696 567 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 NELL1Q92832 810 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 FGF13Q92913 245 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 CSRNP2Q9H175 543 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 LTB4R2Q9NPC1 389 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 FBXW11Q9UKB1 542 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 VAV3Q9UKW4 847 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 PCDHA4Q9UN74 947 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 GIT1Q9Y2X7 761 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 PPME1Q9Y570 386 aa19.3■□□□□ 0.68
RETREG3-210ENST00000590541 ZFHX4Q86UP3 3567 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 ASAP2O43150 1006 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 SLC37A4O43826 429 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 LILRB5O75023 590 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 CD72P21854 359 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 TGM1P22735 817 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 ANAPC15P60006 121 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 PPP2R5CQ13362 524 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 RTP2Q5QGT7 225 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 NOTUMQ6P988 496 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 ATRIPQ8WXE1 791 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 CCDC51Q96ER9 411 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 APOL6Q9BWW8 343 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms