RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 RNF41Q9H4P4 317 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-228ENST00000590347 BLOC1S4Q9NUP1 217 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 GRID1Q9ULK0 1009 aa16.22■□□□□ 0.19
CIRBP-228ENST00000590347 HEMK1Q9Y5R4 338 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-228ENST00000590347 GNPATO15228 680 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 MAPK13O15264 365 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 ATMINO43313 823 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-228ENST00000590347 ITGA2BP08514 1039 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 PFKFB3Q16875 520 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-228ENST00000590347 ARMCX1Q9P291 453 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 ANAPC4Q9UJX5 808 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 STXBP5LQ9Y2K9 1186 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 ITGB4P16144 1822 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 PALM3A6NDB9 673 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-228ENST00000590347 RASA4BC9J798 803 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 RASA4O43374 803 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 PSMG1O95456 288 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 UCHL3P15374 230 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 SLC34A1Q06495 639 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 CHRNDQ07001 517 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 ATG4AQ8WYN0 398 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 HES6Q96HZ4 224 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 ZNF184Q99676 751 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-228ENST00000590347 GANQ9H2C0 597 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 ASIC3Q9UHC3 531 aa16.21■□□□□ 0.19
CIRBP-228ENST00000590347 USP17L12C9JPN9 530 aa16.21■□□□□ 0.18
CIRBP-228ENST00000590347 USP17L21D6R901 530 aa16.21■□□□□ 0.18
CIRBP-228ENST00000590347 DDX3YO15523 660 aaKnown RBP16.21■□□□□ 0.18
CIRBP-228ENST00000590347 OR52Z1P0C646 297 aa16.21■□□□□ 0.18
CIRBP-228ENST00000590347 TBC1D9BQ66K14 1250 aa16.21■□□□□ 0.18
CIRBP-228ENST00000590347 CALML4Q96GE6 196 aa16.21■□□□□ 0.18
CIRBP-228ENST00000590347 STMN4Q9H169 189 aaPredicted RBP16.21■□□□□ 0.18
CIRBP-228ENST00000590347 BCAS3Q9H6U6 928 aa16.21■□□□□ 0.18
CIRBP-228ENST00000590347 SUCLA2Q9P2R7 463 aaPredicted RBP16.21■□□□□ 0.18
CIRBP-228ENST00000590347 NUP188Q5SRE5 1749 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 DDX60Q8IY21 1712 aaKnown RBP16.2■□□□□ 0.18
CIRBP-228ENST00000590347 MYOCOSA0A1B0GUC4 107 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 POC1B-GALNT4F8VUJ3 575 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 GYG2O15488 501 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 NTSR2O95665 410 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 FGFR1P11362 822 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 TRAPPC10P48553 1259 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 GRB10Q13322 594 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 ZYXQ15942 572 aaKnown RBP16.2■□□□□ 0.18
CIRBP-228ENST00000590347 ZCWPW2Q504Y3 356 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 EPM2AIP1Q7L775 607 aaPredicted RBP16.2■□□□□ 0.18
CIRBP-228ENST00000590347 TTC7BQ86TV6 843 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 CCDC125Q86Z20 511 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 MYOCDQ8IZQ8 938 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 TMEM260Q9NX78 707 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 PCDHA4Q9UN74 947 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 NAALADL1Q9UQQ1 740 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 SLIT2O94813 1529 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 THAP12O43422 761 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 VAV1P15498 845 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 PTGIRP43119 386 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 LSAMPQ13449 338 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 CCDC152Q4G0S7 254 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 PLEKHG4Q58EX7 1191 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 ZNF746Q6NUN9 644 aaPredicted RBP16.2■□□□□ 0.18
CIRBP-228ENST00000590347 FBXO27Q8NI29 283 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 AZIN2Q96A70 460 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 FAM161BQ96MY7 647 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 ANKRD27Q96NW4 1050 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 THAP2Q9H0W7 228 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 EBF3Q9H4W6 596 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 RASAL2Q9UJF2 1139 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 SERPINA10Q9UK55 444 aa16.2■□□□□ 0.18
CIRBP-228ENST00000590347 A0A0J9YVX5 310 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-228ENST00000590347 E7ENQ6 273 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 DLATP10515 647 aaKnown RBP16.19■□□□□ 0.18
CIRBP-228ENST00000590347 HARSP12081 509 aaKnown RBP16.19■□□□□ 0.18
CIRBP-228ENST00000590347 SLC5A1P13866 664 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 KLRK1P26718 216 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 FKBP3Q00688 224 aaKnown RBP16.19■□□□□ 0.18
CIRBP-228ENST00000590347 ACAP1Q15027 740 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 WASHC2DQ5SRD0 308 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 NLRP9Q7RTR0 991 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 HIPK4Q8NE63 616 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 LARP4BQ92615 738 aaKnown RBP16.19■□□□□ 0.18
CIRBP-228ENST00000590347 CELF1Q92879 486 aaKnown RBP16.19■□□□□ 0.18
CIRBP-228ENST00000590347 ASCC2Q9H1I8 757 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-228ENST00000590347 USP21Q9UK80 565 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 COL16A1Q07092 1604 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-228ENST00000590347 PASKQ96RG2 1323 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 GSTTP1A0A1W2PQM5 241 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 PIK3CAP42336 1068 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 AMPD3Q01432 767 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 PAOXQ6QHF9 649 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 RFWD2Q8NHY2 731 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 HSPBAP1Q96EW2 488 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 MAGEB18Q96M61 343 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 AAASQ9NRG9 546 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 PDP2Q9P2J9 529 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 GNAT2P19087 354 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 MESDQ14696 234 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 RINLQ6ZS11 566 aa16.19■□□□□ 0.18
CIRBP-228ENST00000590347 MAP7D3Q8IWC1 876 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms