RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 CDR2LQ86X02 465 aaPredicted RBP13.19□□□□□ -0.3
APOC1-206ENST00000590334 ZBTB45Q96K62 511 aaPredicted RBP13.19□□□□□ -0.3
APOC1-206ENST00000590334 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 EIF2AQ9BY44 585 aaKnown RBP13.19□□□□□ -0.3
APOC1-206ENST00000590334 CDT1Q9H211 546 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 SEMA6BQ9H3T3 888 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 ELAC1Q9H777 363 aaKnown RBP13.19□□□□□ -0.3
APOC1-206ENST00000590334 AGPAT3Q9NRZ7 376 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 FAM105AQ9NUU6 356 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
APOC1-206ENST00000590334 PSMA7O14818 248 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
APOC1-206ENST00000590334 OGTO15294 1046 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 NPTXRO95502 500 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 EOMESO95936 686 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 CCNE1P24864 410 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 WDR5P61964 334 aaKnown RBP13.18□□□□□ -0.3
APOC1-206ENST00000590334 MYBPC2Q14324 1141 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 TMEM132AQ24JP5 1023 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 EDRF1Q3B7T1 1238 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 ZNF568Q3ZCX4 644 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 HS2ST1Q7LGA3 356 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 OTOP2Q7RTS6 562 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 ZNF598Q86UK7 904 aaKnown RBP13.18□□□□□ -0.3
APOC1-206ENST00000590334 ECHDC2Q86YB7 292 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 SLC9A9Q8IVB4 645 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 SMG8Q8ND04 991 aaKnown RBP13.18□□□□□ -0.3
APOC1-206ENST00000590334 P2RX5Q93086 422 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 TCHPQ9BT92 498 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 DMAC2Q9NW81 257 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 ANKFY1Q9P2R3 1169 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 DACH1Q9UI36 760 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 PCDHB2Q9Y5E7 798 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 KIAA1671Q9BY89 1806 aa13.18□□□□□ -0.3
APOC1-206ENST00000590334 SYCE3A1L190 88 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 CALUO43852 315 aaPredicted RBP13.17□□□□□ -0.3
APOC1-206ENST00000590334 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
APOC1-206ENST00000590334 ERCC5P28715 1186 aaPredicted RBP13.17□□□□□ -0.3
APOC1-206ENST00000590334 GRM5P41594 1212 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 POU5F1Q01860 360 aaKnown RBP13.17□□□□□ -0.3
APOC1-206ENST00000590334 LRRC63Q05C16 580 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 TYRO3Q06418 890 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 STX1AQ16623 288 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 KYAT1Q16773 422 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 ARMCX5Q6P1M9 558 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.17□□□□□ -0.32e-6■■□□□ 11.9
APOC1-206ENST00000590334 ZBTB33Q86T24 672 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 ZC3H3Q8IXZ2 948 aaKnown RBP13.17□□□□□ -0.3
APOC1-206ENST00000590334 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 TOP1MTQ969P6 601 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 CBWD1Q9BRT8 395 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 MSTO1Q9BUK6 570 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 TRIM6Q9C030 488 aaPredicted RBP13.17□□□□□ -0.3
APOC1-206ENST00000590334 ANO10Q9NW15 660 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 TMEM161AQ9NX61 479 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 RWDD2AQ9UIY3 292 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
APOC1-206ENST00000590334 IPPQ9Y573 584 aa13.17□□□□□ -0.3
APOC1-206ENST00000590334 BICDL2A1A5D9 508 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 LDHAP00338 332 aaKnown RBP13.16□□□□□ -0.3
APOC1-206ENST00000590334 AMHP03971 560 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 CCDC192P0DO97 292 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.3
APOC1-206ENST00000590334 PMS1P54277 932 aaKnown RBP13.16□□□□□ -0.3
APOC1-206ENST00000590334 PAK1Q13153 545 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 HSP90AA2PQ14568 343 aaPredicted RBP13.16□□□□□ -0.3
APOC1-206ENST00000590334 ANKRD40Q6AI12 368 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 TTI2Q6NXR4 508 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 CRELD2Q6UXH1 353 aaPredicted RBP13.16□□□□□ -0.3
APOC1-206ENST00000590334 NPAS4Q8IUM7 802 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 HACE1Q8IYU2 909 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 PHOSPHO2Q8TCD6 241 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 NELFBQ8WX92 580 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 PGBD4Q96DM1 585 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 FBXL18Q96ME1 805 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 MED15Q96RN5 788 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 MTIF3Q9H2K0 278 aaKnown RBP13.16□□□□□ -0.3
APOC1-206ENST00000590334 PRO3102Q9H379 93 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 NXF3Q9H4D5 531 aaKnown RBP13.16□□□□□ -0.3
APOC1-206ENST00000590334 KIAA1586Q9HCI6 787 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 UBN1Q9NPG3 1134 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 HSPBP1Q9NZL4 362 aa13.16□□□□□ -0.3
APOC1-206ENST00000590334 CXXC1Q9P0U4 656 aaPredicted RBP13.16□□□□□ -0.3
APOC1-206ENST00000590334 CPSF3Q9UKF6 684 aaKnown RBP13.16□□□□□ -0.3
APOC1-206ENST00000590334 NLRC5Q86WI3 1866 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 CLIC2O15247 247 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 INPPL1O15357 1258 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 EXTL3O43909 919 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 NR3C1P04150 777 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 ADRB2P07550 413 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 STAG3L1P0CL83 205 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 KCNJ6P48051 423 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 DEFB103AP81534 67 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 SHHQ15465 462 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 KLHL10Q6JEL2 608 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 AGMOQ6ZNB7 445 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 GPD1LQ8N335 351 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 CEP120Q8N960 986 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms