RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 IPPQ9Y573 584 aa14.31□□□□□ -0.12
PRKCSH-210ENST00000589990 PCDHGA2Q9Y5H1 932 aa14.31□□□□□ -0.12
PRKCSH-210ENST00000589990 CNTNAP2Q9UHC6 1331 aa14.31□□□□□ -0.12
PRKCSH-210ENST00000589990 EML1O00423 815 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 TDP2O95551 362 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 ADRB1P08588 477 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 ITGA4P13612 1032 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 FZD5Q13467 585 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 RTP2Q5QGT7 225 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 FUT10Q6P4F1 479 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 GSTCDQ8NEC7 633 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 HDAC7Q8WUI4 952 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 PRPF31Q8WWY3 499 aaKnown RBP14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 FGF13Q92913 245 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 SHDQ96IW2 340 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 CPB2Q96IY4 423 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 PAAF1Q9BRP4 392 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 APOL6Q9BWW8 343 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 ANO2Q9NQ90 1003 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 ZSCAN32Q9NX65 697 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 DPP7Q9UHL4 492 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 CDH7Q9ULB5 785 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 SSX2IPQ9Y2D8 614 aa14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.3□□□□□ -0.12
PRKCSH-210ENST00000589990 CCL16O15467 120 aa14.29□□□□□ -0.12
PRKCSH-210ENST00000589990 ADAM12O43184 909 aa14.29□□□□□ -0.12
PRKCSH-210ENST00000589990 LMNB2Q03252 620 aa14.29□□□□□ -0.12
PRKCSH-210ENST00000589990 SPEM2Q0P670 501 aa14.29□□□□□ -0.12
PRKCSH-210ENST00000589990 ELMSAN1Q6PJG2 1045 aa14.29□□□□□ -0.12
PRKCSH-210ENST00000589990 DHX32Q7L7V1 743 aaKnown RBP14.29□□□□□ -0.12
PRKCSH-210ENST00000589990 MBOAT7Q96N66 472 aa14.29□□□□□ -0.12
PRKCSH-210ENST00000589990 PLA2G2FQ9BZM2 168 aa14.29□□□□□ -0.12
PRKCSH-210ENST00000589990 HCFC1R1Q9NWW0 138 aa14.29□□□□□ -0.12
PRKCSH-210ENST00000589990 VPS54Q9P1Q0 977 aa14.29□□□□□ -0.12
PRKCSH-210ENST00000589990 PRR5-ARHGAP8B1AHC4 643 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 TSPAN1O60635 241 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 AKAP5P24588 427 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 ATRXP46100 2492 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 ARHGAP8P85298 464 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 PRKCQQ04759 706 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 LAMTOR4Q0VGL1 99 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 TPRG1Q6ZUI0 275 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 CDR2LQ86X02 465 aaPredicted RBP14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 ETNPPLQ8TBG4 499 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 TBCKQ8TEA7 893 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 HASPINQ8TF76 798 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 ING5Q8WYH8 240 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 RTKNQ9BST9 563 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 NXF3Q9H4D5 531 aaKnown RBP14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 FNIP2Q9P278 1114 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 FBXW11Q9UKB1 542 aa14.28□□□□□ -0.12
PRKCSH-210ENST00000589990 NRG2O14511 850 aaPredicted RBP14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 ZBTB39O15060 712 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 TDGF1P13385 188 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 IGFBP6P24592 240 aaPredicted RBP14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 GNA11P29992 359 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 USP11P51784 963 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 MTAPQ13126 283 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 USP41Q3LFD5 358 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 PPM1JQ5JR12 505 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 SRGAP1Q7Z6B7 1085 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 GPR161Q8N6U8 529 aaKnown RBP14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 RNF149Q8NC42 400 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 RDM1Q8NG50 284 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 CLDN23Q96B33 292 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 CLSTN3Q9BQT9 956 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 OSBPL6Q9BZF3 934 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 DHX33Q9H6R0 707 aaKnown RBP14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 PRMT8Q9NR22 394 aaPredicted RBP14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 HEBP1Q9NRV9 189 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 KLK14Q9P0G3 267 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 ADAM28Q9UKQ2 775 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 POLIQ9UNA4 740 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 CNOT1A5YKK6 2376 aaKnown RBP14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 ARID2Q68CP9 1835 aa14.27□□□□□ -0.13
PRKCSH-210ENST00000589990 ZZEF1O43149 2961 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 VWA8A3KMH1 1905 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 PRPF3O43395 683 aaKnown RBP14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 C8AP07357 584 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 SDHBP21912 280 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 PSMC5P62195 406 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 NTRK3Q16288 839 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 Q4G0T1 1027 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 ZBTB41Q5SVQ8 909 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 NPAS3Q8IXF0 933 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 CEP170P1Q96L14 293 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 PHF20Q9BVI0 1012 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 COLEC11Q9BWP8 271 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 CXCL16Q9H2A7 254 aa14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.26□□□□□ -0.134e-7■■□□□ 11.8
PRKCSH-210ENST00000589990 ZFP37Q9Y6Q3 630 aaPredicted RBP14.26□□□□□ -0.13
PRKCSH-210ENST00000589990 F5P12259 2224 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 B4GALT5O43286 388 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 SLC37A4O43826 429 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 GDF9O60383 454 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 AMHR2Q16671 573 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 MTSS1LQ765P7 747 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 FERMT3Q86UX7 667 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms