RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 CRCPO75575 148 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 ARP10275 920 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 DHX34Q14147 1143 aaKnown RBP12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 LRRC31Q6UY01 552 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 RHOT1Q8IXI2 618 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 ZNF302Q9NR11 478 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 EPHB6O15197 1021 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 MED7O43513 233 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 HSD17B3P37058 310 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 PDIA2Q13087 525 aaKnown RBP12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 SPARCL1Q14515 664 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 SLC29A2Q14542 456 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 MTRQ99707 1265 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 CBWD1Q9BRT8 395 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 SLC38A10Q9HBR0 1119 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 PFASO15067 1338 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 PDE2AO00408 941 aaPredicted RBP12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 CHN1P15882 459 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 PSMC1P62191 440 aaKnown RBP12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 PHLDB3Q6NSJ2 640 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 ZC3H18Q86VM9 953 aaKnown RBP12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 OR6B3Q8NGW1 331 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 PSPC1Q8WXF1 523 aaKnown RBP12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 CDKL2Q92772 493 aa12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 RBM41Q96IZ5 413 aaKnown RBP12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 PRMT1Q99873 361 aaKnown RBP12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 ZNF70Q9UC06 446 aaPredicted RBP12.86□□□□□ -0.35
PRKAR1A-217ENST00000589228 TCP11X1B4DZS4 312 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 M0QZ92 97 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 ZBTB39O15060 712 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 NR3C2P08235 984 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 ITKQ08881 620 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 BYSLQ13895 437 aaKnown RBP12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 COG2Q14746 738 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 N4BP2L2Q92802 583 aaPredicted RBP12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 FAF2Q96CS3 445 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 TGS1Q96RS0 853 aaKnown RBP12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 KIAA1586Q9HCI6 787 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 UBE4BO95155 1302 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 CHUKO15111 745 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 ITGA4P13612 1032 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 PCGF5Q86SE9 256 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 ANKMY2Q8IV38 441 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 ERP44Q9BS26 406 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 TLR10Q9BXR5 811 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 NACA2Q9H009 215 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 PSD3Q9NYI0 1048 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 TMEM253P0C7T8 217 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 CNGA1P29973 690 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 ARSEP51690 589 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 SEZ6Q53EL9 994 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 CDR2LQ86X02 465 aaPredicted RBP12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 PPM1NQ8N819 430 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 KCNV2Q8TDN2 545 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 ISCUQ9H1K1 167 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 VCXQ9H320 206 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 VCX3BQ9H321 246 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 SLC9A2Q9UBY0 812 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 ENTPD3O75355 529 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 RPS6P62753 249 aaKnown RBP12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 MRPS9P82933 396 aaKnown RBP12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 CBWD2Q8IUF1 395 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 RNF149Q8NC42 400 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 CCHCR1Q8TD31 782 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 MXRA8Q9BRK3 442 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 ETNK1Q9HBU6 452 aa12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 JPH1Q9HDC5 661 aaPredicted RBP12.85□□□□□ -0.35
PRKAR1A-217ENST00000589228 SERPINB6P35237 376 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 ARL4CP56559 192 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 WDR72Q3MJ13 1102 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 RAPH1Q70E73 1250 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 ZFPM1Q8IX07 1006 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 HIPK4Q8NE63 616 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 SYN2Q92777 582 aaPredicted RBP12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 SNF8Q96H20 258 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 EHD4Q9H223 541 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 ESRRAP11474 423 aaPredicted RBP12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 RFX1P22670 979 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 ARL4AP40617 200 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 KCNA1Q09470 495 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 CCT6BQ92526 530 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 POP1Q99575 1024 aaKnown RBP12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 UNC45AQ9H3U1 944 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 HOXC10Q9NYD6 342 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 MAPK13O15264 365 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 SHMT1P34896 483 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 TAF11Q15544 211 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 TAAR1Q96RJ0 339 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 SNX25Q9H3E2 840 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 KCNQ5Q9NR82 932 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 RAB21Q9UL25 225 aa12.84□□□□□ -0.35
PRKAR1A-217ENST00000589228 POLRMTO00411 1230 aaKnown RBP12.83□□□□□ -0.36
PRKAR1A-217ENST00000589228 PHF2O75151 1096 aa12.83□□□□□ -0.36
PRKAR1A-217ENST00000589228 TMPRSS15P98073 1019 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms