RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 MFSD14AQ96MC6 490 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 BOCQ9BWV1 1114 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 JAM3Q9BX67 310 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 SIL1Q9H173 461 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 CHST12Q9NRB3 414 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 CNNM1Q9NRU3 951 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 PA2G4Q9UQ80 394 aaKnown RBP9.19□□□□□ -0.94
ATG4D-210ENST00000588972 PCDHA11Q9Y5I1 949 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 CLRN2A0PK11 232 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 NPHS1O60500 1241 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 KRT37O76014 449 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 GNAI2P04899 355 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 F13BP05160 661 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 PF4V1P10720 104 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 RBP3P10745 1247 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 RECQLP46063 649 aaPredicted RBP9.18□□□□□ -0.94
ATG4D-210ENST00000588972 JAM2P57087 298 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 CAP1Q01518 475 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 HDAC1Q13547 482 aaPredicted RBP9.18□□□□□ -0.94
ATG4D-210ENST00000588972 MVPQ14764 893 aaKnown RBP9.18□□□□□ -0.94
ATG4D-210ENST00000588972 TERF2Q15554 542 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 SYCP2LQ5T4T6 812 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 PPP4R4Q6NUP7 873 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 PGM2L1Q6PCE3 622 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 OSTM1Q86WC4 334 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 CERS5Q8N5B7 392 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 TMEM52Q8NDY8 209 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 ARAP2Q8WZ64 1704 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 PTPN18Q99952 460 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 SPOCK3Q9BQ16 436 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 MKNK2Q9HBH9 465 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 VEZTQ9HBM0 779 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 ERVK13-1Q9NX77 482 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 OBP2AQ9NY56 170 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 STOML1Q9UBI4 398 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 PNMA8BQ9ULN7 279 aaPredicted RBP9.18□□□□□ -0.94
ATG4D-210ENST00000588972 ANKRD6Q9Y2G4 727 aa9.18□□□□□ -0.94
ATG4D-210ENST00000588972 IRS2Q9Y4H2 1338 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 PNMA6EA0A0J9YXQ4 647 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 SLC12A8A0AV02 714 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 VSTM5A8MXK1 200 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 H7BY64 318 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 SRGAP3O43295 1099 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 CFBP00751 764 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 AMY2AP04746 511 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 AMY2BP19961 511 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 CLCN7P51798 805 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 RRP1P56182 461 aaKnown RBP9.17□□□□□ -0.94
ATG4D-210ENST00000588972 PHC1P78364 1004 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 KRT85P78386 507 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 TEKQ02763 1124 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 TNFAIP1Q13829 316 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 GPR19Q15760 415 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 SLC4A8Q2Y0W8 1093 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 ZNF804AQ7Z570 1209 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 ALYREFQ86V81 257 aaKnown RBP9.17□□□□□ -0.94
ATG4D-210ENST00000588972 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.17□□□□□ -0.94
ATG4D-210ENST00000588972 OPTNQ96CV9 577 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 CD209Q9NNX6 404 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 SEMA3GQ9NS98 782 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 PLAGL2Q9UPG8 496 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 GIT1Q9Y2X7 761 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 SPO11Q9Y5K1 396 aa9.17□□□□□ -0.94
ATG4D-210ENST00000588972 F8W031 263 aaPredicted RBP9.16□□□□□ -0.94
ATG4D-210ENST00000588972 H0YGN5 161 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 DVL2O14641 736 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 USP2O75604 605 aaPredicted RBP9.16□□□□□ -0.94
ATG4D-210ENST00000588972 CEACAM5P06731 702 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 KRT15P19012 456 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 SLC9A1P19634 815 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 FKBP1AP62942 108 aaKnown RBP9.16□□□□□ -0.94
ATG4D-210ENST00000588972 SMAD3P84022 425 aaKnown RBP9.16□□□□□ -0.94
ATG4D-210ENST00000588972 IRF9Q00978 393 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 MTX1Q13505 466 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 LRRC32Q14392 662 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 ODF1Q14990 250 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 SMAD2Q15796 467 aaKnown RBP9.16□□□□□ -0.94
ATG4D-210ENST00000588972 METTL24Q5JXM2 366 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 FSTL4Q6MZW2 842 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 HHIPL2Q6UWX4 724 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 C15orf52Q6ZUT6 534 aaKnown RBP9.16□□□□□ -0.94
ATG4D-210ENST00000588972 ATG9AQ7Z3C6 839 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 RASSF3Q86WH2 238 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 CMIPQ8IY22 773 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 Q8N1Y9 231 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 SCARF2Q96GP6 870 aaPredicted RBP9.16□□□□□ -0.94
ATG4D-210ENST00000588972 TMEM169Q96HH4 297 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 PRMT6Q96LA8 375 aaPredicted RBP9.16□□□□□ -0.94
ATG4D-210ENST00000588972 TOPORSQ9NS56 1045 aaPredicted RBP9.16□□□□□ -0.94
ATG4D-210ENST00000588972 ADGRE2Q9UHX3 823 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 PCDHAC2Q9Y5I4 1007 aa9.16□□□□□ -0.94
ATG4D-210ENST00000588972 MYH13Q9UKX3 1938 aa9.15□□□□□ -0.94
ATG4D-210ENST00000588972 ZSWIM8A7E2V4 1837 aa9.15□□□□□ -0.94
ATG4D-210ENST00000588972 AOX1Q06278 1338 aa9.15□□□□□ -0.94
ATG4D-210ENST00000588972 MROH5Q6ZUA9 1318 aa9.15□□□□□ -0.94
ATG4D-210ENST00000588972 CCL15-CCL14A0A0B4J2E2 113 aa9.15□□□□□ -0.94
ATG4D-210ENST00000588972 TCRBV5S4A2TA0A5A2 114 aa9.15□□□□□ -0.94
ATG4D-210ENST00000588972 EYA2O00167 538 aa9.15□□□□□ -0.94
ATG4D-210ENST00000588972 PCDHGA12O60330 932 aa9.15□□□□□ -0.94
ATG4D-210ENST00000588972 WDHD1O75717 1129 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms