RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 A0A1B0GUA9 196 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 C2orf71A6NGG8 1288 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 CCDC169A6NNP5 214 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 SFI1A8K8P3 1242 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 EYA4O95677 639 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 PRKCBP05771 671 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
RFX1-204ENST00000588885 ALADP13716 330 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 MUTP22033 750 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 RAD51AP2Q09MP3 1159 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 SMAD4Q13485 552 aaKnown RBP12.75□□□□□ -0.37
RFX1-204ENST00000588885 PRPF4BQ13523 1007 aaKnown RBP12.75□□□□□ -0.37
RFX1-204ENST00000588885 SMC1AQ14683 1233 aaKnown RBP12.75□□□□□ -0.37
RFX1-204ENST00000588885 CDCA2Q69YH5 1023 aaPredicted RBP12.75□□□□□ -0.37
RFX1-204ENST00000588885 SLC27A1Q6PCB7 646 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 DDX53Q86TM3 631 aaKnown RBP12.75□□□□□ -0.37
RFX1-204ENST00000588885 CNNM3Q8NE01 707 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 RABGGTAQ92696 567 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 MSLNLQ96KJ4 702 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 LRFN3Q9BTN0 628 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 VN1R3Q9BXE9 311 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 C2orf40Q9H1Z8 148 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 FZD8Q9H461 694 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 UBN1Q9NPG3 1134 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 PRMT7Q9NVM4 692 aaPredicted RBP12.75□□□□□ -0.37
RFX1-204ENST00000588885 KANSL3Q9P2N6 904 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 PRG3Q9Y2Y8 225 aaPredicted RBP12.75□□□□□ -0.37
RFX1-204ENST00000588885 STK24Q9Y6E0 443 aa12.75□□□□□ -0.37
RFX1-204ENST00000588885 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.74□□□□□ -0.37
RFX1-204ENST00000588885 F8W810 466 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 NRP1O14786 923 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 CLASP2O75122 1294 aaKnown RBP12.74□□□□□ -0.37
RFX1-204ENST00000588885 HIP1RO75146 1068 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 EDN1P05305 212 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 NAMPTP43490 491 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 OR1G1P47890 313 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 PEX3P56589 373 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 ZP2Q05996 745 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 SMAD2Q15796 467 aaKnown RBP12.74□□□□□ -0.37
RFX1-204ENST00000588885 MAPK6Q16659 721 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 TAS1R1Q7RTX1 841 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 HACE1Q8IYU2 909 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 KIFAP3Q92845 792 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 PNMA5Q96PV4 448 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 POP1Q99575 1024 aaKnown RBP12.74□□□□□ -0.37
RFX1-204ENST00000588885 CDCA3Q99618 268 aaPredicted RBP12.74□□□□□ -0.37
RFX1-204ENST00000588885 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
RFX1-204ENST00000588885 USP15Q9Y4E8 981 aaPredicted RBP12.74□□□□□ -0.37
RFX1-204ENST00000588885 NPHP3-ACAD11A0A0J9YXS1 232 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 C2CD2LO14523 706 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 DNM1Q05193 864 aaKnown RBP12.73□□□□□ -0.37
RFX1-204ENST00000588885 COASYQ13057 564 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 BMS1Q14692 1282 aaKnown RBP12.73□□□□□ -0.37
RFX1-204ENST00000588885 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 NT5DC1Q5TFE4 455 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 EEF1DP3Q658K8 133 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 RINT1Q6NUQ1 792 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 ADHFE1Q8IWW8 467 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 COLGALT2Q8IYK4 626 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 SMRP1Q8NCR6 262 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 RSPH1Q8WYR4 309 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 CDK5RAP3Q96JB5 506 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 CCDC113Q9H0I3 377 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 ZBP1Q9H171 429 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 CXCL16Q9H2A7 254 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 ZSCAN16Q9H4T2 348 aaPredicted RBP12.73□□□□□ -0.37
RFX1-204ENST00000588885 SNTG2Q9NY99 539 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 CACNG4Q9UBN1 327 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 GIT1Q9Y2X7 761 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 TRIOO75962 3097 aa12.73□□□□□ -0.37
RFX1-204ENST00000588885 PI4K2BG5E9Z4 385 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 ACKR2O00590 384 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 N4BP3O15049 544 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 CTSAP10619 480 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 PLA2G5P39877 138 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 NPTX2P47972 431 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 EFNA5P52803 228 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 GRIN1Q05586 938 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 DHX8Q14562 1220 aaKnown RBP12.72□□□□□ -0.37
RFX1-204ENST00000588885 SF3A1Q15459 793 aaKnown RBP12.72□□□□□ -0.37
RFX1-204ENST00000588885 FAM187BQ17R55 369 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 ANKRD54Q6NXT1 300 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 KANK3Q6NY19 840 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 SYCE2Q6PIF2 218 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 C1orf186Q6ZWK4 172 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 BRAPQ7Z569 592 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 CABP7Q86V35 215 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 DAW1Q8N136 415 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 C12orf76Q8N812 135 aaPredicted RBP12.72□□□□□ -0.37
RFX1-204ENST00000588885 GSTCDQ8NEC7 633 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 GBP4Q96PP9 640 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 TMEM175Q9BSA9 504 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 PRKAG3Q9UGI9 489 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 CDH22Q9UJ99 828 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 GDAQ9Y2T3 454 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 HCFC2Q9Y5Z7 792 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 CLIC4Q9Y696 253 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 MYH15Q9Y2K3 1946 aa12.72□□□□□ -0.37
RFX1-204ENST00000588885 K7ERI5 159 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms