RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 SLC26A4O43511 780 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 NPTX2P47972 431 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 ZP2Q05996 745 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 ANKRD54Q6NXT1 300 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 TMEM184AQ6ZMB5 413 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 COLGALT2Q8IYK4 626 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 COLEC11Q9BWP8 271 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 C17orf75Q9HAS0 396 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 KMT5AQ9NQR1 393 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 MIOSQ9NXC5 875 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 DAXXQ9UER7 740 aaPredicted RBP21.54■■□□□ 1.04
TPM4-208ENST00000588410 USP20Q9Y2K6 914 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 PHLPP2Q6ZVD8 1323 aa21.54■■□□□ 1.04
TPM4-208ENST00000588410 ZMYM2Q9UBW7 1377 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 CLASP2O75122 1294 aaKnown RBP21.53■■□□□ 1.04
TPM4-208ENST00000588410 PLA2G4BP0C869 781 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 SYT1P21579 422 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 GUCY2CP25092 1073 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 LONP1P36776 959 aaKnown RBP21.53■■□□□ 1.04
TPM4-208ENST00000588410 GRIK3Q13003 919 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 DCAF4L1Q3SXM0 396 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 ATF7IP2Q5U623 682 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 SYT2Q8N9I0 419 aaPredicted RBP21.53■■□□□ 1.04
TPM4-208ENST00000588410 C1QTNF1Q9BXJ1 281 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 SNTG2Q9NY99 539 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 KCNG1Q9UIX4 513 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 RBM19Q9Y4C8 960 aaKnown RBP21.53■■□□□ 1.04
TPM4-208ENST00000588410 USP15Q9Y4E8 981 aaPredicted RBP21.53■■□□□ 1.04
TPM4-208ENST00000588410 GTF3C3Q9Y5Q9 886 aa21.53■■□□□ 1.04
TPM4-208ENST00000588410 HOXB8P17481 243 aaPredicted RBP21.52■■□□□ 1.04
TPM4-208ENST00000588410 DSC1Q08554 894 aa21.52■■□□□ 1.04
TPM4-208ENST00000588410 RAD51AP2Q09MP3 1159 aa21.52■■□□□ 1.04
TPM4-208ENST00000588410 TMEM119Q4V9L6 283 aa21.52■■□□□ 1.04
TPM4-208ENST00000588410 DAW1Q8N136 415 aa21.52■■□□□ 1.04
TPM4-208ENST00000588410 EMILIN2Q9BXX0 1053 aa21.52■■□□□ 1.04
TPM4-208ENST00000588410 TMEM134Q9H6X4 195 aa21.52■■□□□ 1.04
TPM4-208ENST00000588410 MRPL17Q9NRX2 175 aaKnown RBP21.52■■□□□ 1.04
TPM4-208ENST00000588410 KCND2Q9NZV8 630 aa21.52■■□□□ 1.04
TPM4-208ENST00000588410 HCFC2Q9Y5Z7 792 aa21.52■■□□□ 1.04
TPM4-208ENST00000588410 IRAK3Q9Y616 596 aa21.52■■□□□ 1.04
TPM4-208ENST00000588410 MYO7AQ13402 2215 aa21.52■■□□□ 1.04
TPM4-208ENST00000588410 TCF20Q9UGU0 1960 aaKnown RBP21.51■■□□□ 1.03
TPM4-208ENST00000588410 SFI1A8K8P3 1242 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 URODP06132 367 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 SMTNP53814 917 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 MAPK7Q13164 816 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 KCNC3Q14003 757 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 PTPN14Q15678 1187 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 TPRNQ4KMQ1 711 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 NT5DC1Q5TFE4 455 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 EEF1DP3Q658K8 133 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 VN1R3Q9BXE9 311 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 MRPL4Q9BYD3 311 aaKnown RBP21.51■■□□□ 1.03
TPM4-208ENST00000588410 SSX2IPQ9Y2D8 614 aa21.51■■□□□ 1.03
TPM4-208ENST00000588410 PLXNA4Q9HCM2 1894 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 C19orf67A6NJJ6 358 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 SLC16A4O15374 487 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 RECQL4O94761 1208 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 SOD2P04179 222 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 EDN1P05305 212 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 PLS3P13797 630 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 SLC12A3P55017 1021 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 RESTQ13127 1097 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 PPFIBP1Q86W92 1011 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 GSTCDQ8NEC7 633 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 HERC2P3Q9BVR0 1158 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 APOL5Q9BWW9 433 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 EPHX3Q9H6B9 360 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 MARCH5Q9NX47 278 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 ARHGAP28Q9P2N2 729 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 TNFSF13BQ9Y275 285 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 GDAQ9Y2T3 454 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 CLIC4Q9Y696 253 aa21.5■■□□□ 1.03
TPM4-208ENST00000588410 BRWD1Q9NSI6 2320 aa21.49■■□□□ 1.03
TPM4-208ENST00000588410 KLRC2P26717 231 aa21.49■■□□□ 1.03
TPM4-208ENST00000588410 STRN3Q13033 797 aa21.49■■□□□ 1.03
TPM4-208ENST00000588410 DHX8Q14562 1220 aaKnown RBP21.49■■□□□ 1.03
TPM4-208ENST00000588410 KIAA1841Q6NSI8 718 aa21.49■■□□□ 1.03
TPM4-208ENST00000588410 SPIRE2Q8WWL2 714 aa21.49■■□□□ 1.03
TPM4-208ENST00000588410 TCHPQ9BT92 498 aa21.49■■□□□ 1.03
TPM4-208ENST00000588410 DZANK1Q9NVP4 752 aa21.49■■□□□ 1.03
TPM4-208ENST00000588410 SPDYE4A6NLX3 237 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 C2CD2LO14523 706 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 KRT18P05783 430 aaKnown RBP21.48■■□□□ 1.03
TPM4-208ENST00000588410 THP07101 528 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 ALADP13716 330 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 GRIN1Q05586 938 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 TUSC3Q13454 348 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 ZNF568Q3ZCX4 644 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 CES5AQ6NT32 575 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 SYCE2Q6PIF2 218 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 GPBP1Q86WP2 473 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 HSCBQ8IWL3 235 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 KHSRPQ92945 711 aaKnown RBP eCLIP21.48■■□□□ 1.03
TPM4-208ENST00000588410 SNX21Q969T3 373 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 KLHL5Q96PQ7 755 aa21.48■■□□□ 1.03
TPM4-208ENST00000588410 ACO2Q99798 780 aaKnown RBP21.48■■□□□ 1.03
TPM4-208ENST00000588410 NTPCRQ9BSD7 190 aaKnown RBP21.48■■□□□ 1.03
TPM4-208ENST00000588410 PHF7Q9BWX1 381 aaPredicted RBP21.48■■□□□ 1.03
TPM4-208ENST00000588410 S1PR5Q9H228 398 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms