RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 TMEM206Q9H813 350 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 RC3H2Q9HBD1 1191 aaKnown RBP13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 KANSL3Q9P2N6 904 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 PARP2Q9UGN5 583 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 MTUS1Q9ULD2 1270 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 UBE4BO95155 1302 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 FNDC1Q4ZHG4 1894 aaPredicted RBP13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 NLRC5Q86WI3 1866 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 KIF20AO95235 890 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 LAG3P18627 525 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 MLH1P40692 756 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 GATMP50440 423 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 KYAT1Q16773 422 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 NOMO2Q5JPE7 1267 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 CLLU1OSQ5K130 101 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 MRPL10Q7Z7H8 261 aaKnown RBP13□□□□□ -0.33
SDHDP1-201ENST00000588055 ZBTB33Q86T24 672 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 CRIPAKQ8N1N5 446 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 SMG8Q8ND04 991 aaKnown RBP13□□□□□ -0.33
SDHDP1-201ENST00000588055 FBXO22Q8NEZ5 403 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 ARNTL2Q8WYA1 636 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 TIGD1Q96MW7 591 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 FAM161BQ96MY7 647 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 FIZ1Q96SL8 496 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 GAS2L1Q99501 681 aaPredicted RBP13□□□□□ -0.33
SDHDP1-201ENST00000588055 C11orf84Q9BUA3 381 aaPredicted RBP13□□□□□ -0.33
SDHDP1-201ENST00000588055 CDT1Q9H211 546 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 RMND1Q9NWS8 449 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 GIT1Q9Y2X7 761 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 HES2Q9Y543 173 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 PCDHB12Q9Y5F1 795 aa13□□□□□ -0.33
SDHDP1-201ENST00000588055 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 EIF3DO15371 548 aaKnown RBP eCLIP12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 SMC2O95347 1197 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 PIGRP01833 764 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 RPN1P04843 607 aaKnown RBP12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 EDN1P05305 212 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 MYBP10242 640 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 CASP1P29466 404 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 PPM1AP35813 382 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 PSMD2Q13200 908 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 ZC2HC1CQ53FD0 456 aaPredicted RBP12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 EEF1DP3Q658K8 133 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 SLFN12LQ6IEE8 588 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 CLEC17AQ6ZS10 378 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 CASD1Q96PB1 797 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 MSTO1Q9BUK6 570 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 USP20Q9Y2K6 914 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 GDAQ9Y2T3 454 aa12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 MRPL42Q9Y6G3 142 aaKnown RBP12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 COL4A4P53420 1690 aaPredicted RBP12.99□□□□□ -0.33
SDHDP1-201ENST00000588055 KIAA1671Q9BY89 1806 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 ARL5CA6NH57 179 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 ZC3H11AO75152 810 aaKnown RBP eCLIP12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 NR1I2O75469 434 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 PPP1R37O75864 691 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 RECQL4O94761 1208 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 PROZP22891 400 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 AKAP5P24588 427 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 GRM5P41594 1212 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 CASP5P51878 434 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 ERVK-21P61565 698 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 MCL1Q07820 350 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 GRIK3Q13003 919 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 HSP90AA2PQ14568 343 aaPredicted RBP12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 AGMOQ6ZNB7 445 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 HS2ST1Q7LGA3 356 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 TMEM192Q8IY95 271 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 THNSL1Q8IYQ7 743 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 POMGNT1Q8WZA1 660 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 CLP1Q92989 425 aaKnown RBP12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 ZNF558Q96NG5 402 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 PLVAPQ9BX97 442 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 GBP3Q9H0R5 595 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 TTYH1Q9H313 450 aaPredicted RBP12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 SEMA6BQ9H3T3 888 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 CERS4Q9HA82 394 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 PTPRHQ9HD43 1115 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 SNTG2Q9NY99 539 aa12.98□□□□□ -0.33
SDHDP1-201ENST00000588055 MEIS3P2A8K0S8 358 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 GADD45BO75293 160 aaPredicted RBP12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 OFD1O75665 1012 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 PRPF6O94906 941 aaKnown RBP12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 RB1P06400 928 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 ALDH7A1P49419 539 aaKnown RBP12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 SCNN1GP51170 649 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 OSTNP61366 133 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 DPYDQ12882 1025 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 SNW1Q13573 536 aaKnown RBP12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 EPC2Q52LR7 807 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 ARMCX5Q6P1M9 558 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 Q7L0L9 218 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 ENGASEQ8NFI3 743 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 SMARCE1Q969G3 411 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 ACAP3Q96P50 834 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 GAD1Q99259 594 aa12.97□□□□□ -0.33
SDHDP1-201ENST00000588055 C17orf80Q9BSJ5 609 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms