RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 PTPRHQ9HD43 1115 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 PARP2Q9UGN5 583 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 HES2Q9Y543 173 aa11.1□□□□□ -0.63
TPM4-207ENST00000588032 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
TPM4-207ENST00000588032 FSD2A1L4K1 749 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 MYMKA6NI61 221 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 TTLL13PA6NNM8 815 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 ZC3H11AO75152 810 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM4-207ENST00000588032 TOM1L1O75674 476 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 POMCP01189 267 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 GALTP07902 379 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 MCF2P10911 925 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 GAP43P17677 238 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 MLH1P40692 756 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 CAMK1Q14012 370 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 ADALQ6DHV7 355 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 DYMQ7RTS9 669 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 TAS1R3Q7RTX0 852 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM4-207ENST00000588032 FAM178BQ8IXR5 827 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 PDILTQ8N807 584 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 MICAL1Q8TDZ2 1067 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 TMEM169Q96HH4 297 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 RPS6KC1Q96S38 1066 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 TCHPQ9BT92 498 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 APOL6Q9BWW8 343 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 TNMDQ9H2S6 317 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 ST6GALNAC4Q9H4F1 302 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 NGRNQ9NPE2 291 aaKnown RBP11.09□□□□□ -0.63
TPM4-207ENST00000588032 TLR9Q9NR96 1032 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 THEGQ9P2T0 379 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 HCSTQ9UBK5 93 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 TBX20Q9UMR3 447 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 FAN1Q9Y2M0 1017 aa11.09□□□□□ -0.63
TPM4-207ENST00000588032 NLRC5Q86WI3 1866 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 A0A087X0B3 334 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 K7ENM7 598 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 CLDN3O15551 220 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 DDHD2O94830 711 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 EDN1P05305 212 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 PROZP22891 400 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 CMA1P23946 247 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 AKAP5P24588 427 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 GRM5P41594 1212 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 YARSP54577 528 aaKnown RBP11.08□□□□□ -0.64
TPM4-207ENST00000588032 GTF2BQ00403 316 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 DSC1Q08554 894 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 GRIK3Q13003 919 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 E2F4Q16254 413 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 KYAT1Q16773 422 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 ZNF568Q3ZCX4 644 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 TCEAL5Q5H9L2 206 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 RESP18Q5W5W9 173 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 EEF1DP3Q658K8 133 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 MPZL3Q6UWV2 235 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 ZNF720Q7Z2F6 126 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 DDX53Q86TM3 631 aaKnown RBP11.08□□□□□ -0.64
TPM4-207ENST00000588032 ZNF280BQ86YH2 543 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 COLGALT2Q8IYK4 626 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 LEO1Q8WVC0 666 aaPredicted RBP11.08□□□□□ -0.64
TPM4-207ENST00000588032 HLA-CQ95604 372 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 HVCN1Q96D96 273 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 DNAJC19Q96DA6 116 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 IGSF21Q96ID5 467 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 CCDC94Q9BW85 323 aaPredicted RBP11.08□□□□□ -0.64
TPM4-207ENST00000588032 TARS2Q9BW92 718 aaKnown RBP11.08□□□□□ -0.64
TPM4-207ENST00000588032 COLEC11Q9BWP8 271 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 GBP3Q9H0R5 595 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 TOPORSQ9NS56 1045 aaPredicted RBP11.08□□□□□ -0.64
TPM4-207ENST00000588032 KBTBD4Q9NVX7 518 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 SNTG2Q9NY99 539 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 USP25Q9UHP3 1055 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 USP20Q9Y2K6 914 aa11.08□□□□□ -0.64
TPM4-207ENST00000588032 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.07□□□□□ -0.64
TPM4-207ENST00000588032 NRP1O14786 923 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 FSCN2O14926 492 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 POLR2DO15514 142 aaKnown RBP11.07□□□□□ -0.64
TPM4-207ENST00000588032 RECQL4O94761 1208 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 PIGRP01833 764 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 THP07101 528 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 DNAJB1P25685 340 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 SCNN1GP51170 649 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 AFF1P51825 1210 aaKnown RBP11.07□□□□□ -0.64
TPM4-207ENST00000588032 MRPS5P82675 430 aaKnown RBP11.07□□□□□ -0.64
TPM4-207ENST00000588032 ALCAMQ13740 583 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 COL19A1Q14993 1142 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 CNNM4Q6P4Q7 775 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 CCDC65Q8IXS2 484 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 GSTCDQ8NEC7 633 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 DHX58Q96C10 678 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 BICD1Q96G01 975 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 ZFP42Q96MM3 310 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 ACAP3Q96P50 834 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 FIZ1Q96SL8 496 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 CDCA3Q99618 268 aaPredicted RBP11.07□□□□□ -0.64
TPM4-207ENST00000588032 CDT1Q9H211 546 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 OLFML3Q9NRN5 406 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 PANK4Q9NVE7 773 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 MIOSQ9NXC5 875 aa11.07□□□□□ -0.64
TPM4-207ENST00000588032 KLK14Q9P0G3 267 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms