RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CACNG4Q9UBN1 327 aa15.88■□□□□ 0.13
VMP1-206ENST00000587945 TRIOO75962 3097 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 CYP11B2P19099 503 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 CCT6AP40227 531 aaKnown RBP15.87■□□□□ 0.13
VMP1-206ENST00000587945 ORC2Q13416 577 aaPredicted RBP15.87■□□□□ 0.13
VMP1-206ENST00000587945 IER5LQ5T953 404 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 CDCA2Q69YH5 1023 aaPredicted RBP15.87■□□□□ 0.13
VMP1-206ENST00000587945 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 ZBTB8OSQ8IWT0 167 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 ASIC4Q96FT7 647 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 B3GALT6Q96L58 329 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 RPS6KC1Q96S38 1066 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 KIFC3Q9BVG8 833 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 SMOC2Q9H3U7 446 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 FZD8Q9H461 694 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 PRMT7Q9NVM4 692 aaPredicted RBP15.87■□□□□ 0.13
VMP1-206ENST00000587945 STK39Q9UEW8 545 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 MUC6Q6W4X9 2439 aa15.87■□□□□ 0.13
VMP1-206ENST00000587945 TEX28O15482 410 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 EFEMP2O95967 443 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 EDN1P05305 212 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 ASGR2P07307 311 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 TRAPPC10P48553 1259 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 TOB1P50616 345 aaPredicted RBP15.86■□□□□ 0.13
VMP1-206ENST00000587945 TMEM132AQ24JP5 1023 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 KIAA0319Q5VV43 1072 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 GPR149Q86SP6 731 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 RNF168Q8IYW5 571 aaPredicted RBP15.86■□□□□ 0.13
VMP1-206ENST00000587945 COLEC11Q9BWP8 271 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 PDZD7Q9H5P4 517 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 SFXN1Q9H9B4 322 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 LIMD1Q9UGP4 676 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 NOL7Q9UMY1 257 aaKnown RBP15.86■□□□□ 0.13
VMP1-206ENST00000587945 PCDHB6Q9Y5E3 794 aa15.86■□□□□ 0.13
VMP1-206ENST00000587945 NR1I2O75469 434 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 BRD1O95696 1058 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 PDGFBP01127 241 aaPredicted RBP15.85■□□□□ 0.13
VMP1-206ENST00000587945 PRKCBP05771 671 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 CENPBP07199 599 aaPredicted RBP15.85■□□□□ 0.13
VMP1-206ENST00000587945 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
VMP1-206ENST00000587945 GLUD2P49448 558 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 FXR2P51116 673 aaKnown RBP eCLIP15.85■□□□□ 0.13
VMP1-206ENST00000587945 NHLH1Q02575 133 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 GRIK3Q13003 919 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 PRPF4BQ13523 1007 aaKnown RBP15.85■□□□□ 0.13
VMP1-206ENST00000587945 FAM187BQ17R55 369 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 EEF1DP3Q658K8 133 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 ALYREFQ86V81 257 aaKnown RBP15.85■□□□□ 0.13
VMP1-206ENST00000587945 SUGP1Q8IWZ8 645 aaKnown RBP15.85■□□□□ 0.13
VMP1-206ENST00000587945 FBXL6Q8N531 539 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 TDRD5Q8NAT2 981 aaKnown RBP15.85■□□□□ 0.13
VMP1-206ENST00000587945 DEPTORQ8TB45 409 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 PRIMPOLQ96LW4 560 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 PAAF1Q9BRP4 392 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 GPR62Q9BZJ7 368 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 C2orf40Q9H1Z8 148 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 CXCL16Q9H2A7 254 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 BHMT2Q9H2M3 363 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 MAN1C1Q9NR34 630 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 SNTG2Q9NY99 539 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 LRWD1Q9UFC0 647 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 KIAA1024Q9UPX6 916 aa15.85■□□□□ 0.13
VMP1-206ENST00000587945 PP2D1A8MPX8 630 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 SPATA31D3P0C874 917 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 NAMPTP43490 491 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 VCPP55072 806 aaKnown RBP15.84■□□□□ 0.13
VMP1-206ENST00000587945 DSG1Q02413 1049 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 PTGDRQ13258 359 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 MAPK6Q16659 721 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 HAUS3Q68CZ6 603 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 FUT10Q6P4F1 479 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 SPATA31D4Q6ZUB0 917 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 PRSS33Q8NF86 280 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 SNX29Q8TEQ0 813 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 CCDC113Q9H0I3 377 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 KCNH6Q9H252 994 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 RXFP1Q9HBX9 757 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 CHST7Q9NS84 486 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 DDX19AQ9NUU7 478 aaKnown RBP15.84■□□□□ 0.13
VMP1-206ENST00000587945 SORCS3Q9UPU3 1222 aa15.84■□□□□ 0.13
VMP1-206ENST00000587945 CASTOR2A6NHX0 329 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 ACKR2O00590 384 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 PTGESO14684 152 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 N4BP3O15049 544 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 TADA2AO75478 443 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 RFPL2O75678 378 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 RECQL4O94761 1208 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 GLUD1P00367 558 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 ADH1AP07327 375 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 RPL17P18621 184 aaKnown RBP15.83■□□□□ 0.12
VMP1-206ENST00000587945 MUTP22033 750 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 CDC25AP30304 524 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 MTMR3Q13615 1198 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 IL17AQ16552 155 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 PALB2Q86YC2 1186 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 GLYCTKQ8IVS8 523 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 ZDHHC14Q8IZN3 488 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 HASPINQ8TF76 798 aa15.83■□□□□ 0.12
VMP1-206ENST00000587945 RIN2Q8WYP3 895 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms