RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 MRPL49Q13405 166 aaKnown RBP5.92□□□□□ -1.46
VMP1-205ENST00000587470 DHCR24Q15392 516 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 ATP13A4Q4VNC1 1196 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 PLEKHG4Q58EX7 1191 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 METTL24Q5JXM2 366 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 FAM83AQ86UY5 434 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 GLB1L2Q8IW92 636 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 ULK2Q8IYT8 1036 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 PGBD4Q96DM1 585 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 CEP89Q96ST8 783 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 CPPED1Q9BRF8 314 aaPredicted RBP5.92□□□□□ -1.46
VMP1-205ENST00000587470 GPRC5BQ9NZH0 403 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 TRPS1Q9UHF7 1281 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 NOC2LQ9Y3T9 749 aaKnown RBP5.92□□□□□ -1.46
VMP1-205ENST00000587470 IQGAP2Q13576 1575 aa5.92□□□□□ -1.46
VMP1-205ENST00000587470 FAM20BO75063 409 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 BPIP17213 487 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 HK1P19367 917 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 PTGS2P35354 604 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 GYS2P54840 703 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 DUSP2Q05923 314 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 PPARAQ07869 468 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 MGAT5Q09328 741 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 FAM214AQ32MH5 1076 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 LYSMD2Q8IV50 215 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 SLC41A1Q8IVJ1 513 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 OR14C36Q8NHC7 312 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 HAS1Q92839 578 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 USP7Q93009 1102 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 IL17RAQ96F46 866 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 PRRX2Q99811 253 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 IKZF4Q9H2S9 585 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 TBX22Q9Y458 520 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 ZCCHC11Q5TAX3 1644 aaKnown RBP5.91□□□□□ -1.46
VMP1-205ENST00000587470 LTBP4Q8N2S1 1624 aa5.91□□□□□ -1.46
VMP1-205ENST00000587470 STRCQ7RTU9 1775 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 ZEB2O60315 1214 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 DNAJC6O75061 913 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 CFBP00751 764 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 GZMKP49863 264 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 UBE3CQ15386 1083 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 CCDC62Q6P9F0 684 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 DDX46Q7L014 1031 aaKnown RBP5.9□□□□□ -1.46
VMP1-205ENST00000587470 LDLRAD3Q86YD5 345 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 ZNF276Q8N554 614 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 MSL3Q8N5Y2 521 aaKnown RBP5.9□□□□□ -1.46
VMP1-205ENST00000587470 GLB1L3Q8NCI6 653 aaPredicted RBP5.9□□□□□ -1.46
VMP1-205ENST00000587470 SLC25A43Q8WUT9 341 aaPredicted RBP5.9□□□□□ -1.46
VMP1-205ENST00000587470 NRDE2Q9H7Z3 1164 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 EVLQ9UI08 416 aaPredicted RBP5.9□□□□□ -1.46
VMP1-205ENST00000587470 HDAC5Q9UQL6 1122 aa5.9□□□□□ -1.46
VMP1-205ENST00000587470 A0A087X1B8 175 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.89□□□□□ -1.47
VMP1-205ENST00000587470 GRXCR1A8MXD5 290 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 RPS6KA4O75676 772 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 RECQL4O94761 1208 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 LTA4HP09960 611 aaKnown RBP5.89□□□□□ -1.47
VMP1-205ENST00000587470 CLEC2LP0C7M8 214 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 GYPEP15421 78 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 HSPA1LP34931 641 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 TRIM25Q14258 630 aaKnown RBP5.89□□□□□ -1.47
VMP1-205ENST00000587470 C19orf54Q5BKX5 351 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 DOK3Q7L591 496 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 ZNF627Q7L945 461 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 MRGPRGQ86SM5 289 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 IFT22Q9H7X7 185 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 GOLGA3Q08378 1498 aa5.89□□□□□ -1.47
VMP1-205ENST00000587470 PREX1Q8TCU6 1659 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 LOC105371045A0A1W2PR82 267 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 MEF2AQ02078 507 aaPredicted RBP5.88□□□□□ -1.47
VMP1-205ENST00000587470 PITRM1Q5JRX3 1037 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 MRGPREQ86SM8 312 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 RNF180Q86T96 592 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 OR52N2Q8NGI0 321 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 LENG9Q96B70 501 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 TTC1Q99614 292 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.88□□□□□ -1.47
VMP1-205ENST00000587470 SORCS3Q9UPU3 1222 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 CLCA2Q9UQC9 943 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 CDY2AQ9Y6F7 541 aa5.88□□□□□ -1.47
VMP1-205ENST00000587470 TLDC2A0PJX2 215 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 TMEM191CA6NGB0 347 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 NEMP1O14524 444 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 TRIM24O15164 1050 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 TOM1O60784 492 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 PPFIA4O75335 1185 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 ULK1O75385 1050 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 LGALS4P56470 323 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 SESN3P58005 492 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 APBA1Q02410 837 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 PDCD1Q15116 288 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 VPS72Q15906 364 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 CT83Q5H943 113 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 SYNE4Q8N205 404 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 CPT1CQ8TCG5 803 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 PAWRQ96IZ0 340 aaKnown RBP5.87□□□□□ -1.47
VMP1-205ENST00000587470 LSM14BQ9BX40 385 aaKnown RBP5.87□□□□□ -1.47
VMP1-205ENST00000587470 KCTD10Q9H3F6 313 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 PRDM12Q9H4Q4 367 aa5.87□□□□□ -1.47
VMP1-205ENST00000587470 C11orf21Q9P2W6 132 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms