RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 PRKAG2Q9UGJ0 569 aa13.77□□□□□ -0.21
DNMT1-208ENST00000586667 RWDD2AQ9UIY3 292 aa13.77□□□□□ -0.21
DNMT1-208ENST00000586667 PDCD11Q14690 1871 aaKnown RBP13.76□□□□□ -0.21
DNMT1-208ENST00000586667 MEIS3P2A8K0S8 358 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 KIF20AO95235 890 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 NPTXRO95502 500 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 ADRB2P07550 413 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 GARTP22102 1010 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 MAGEA10P43363 369 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-208ENST00000586667 WNT7BP56706 349 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 STX17P56962 302 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 SNRPFP62306 86 aaKnown RBP13.76□□□□□ -0.21
DNMT1-208ENST00000586667 PPIGQ13427 754 aaKnown RBP eCLIP13.76□□□□□ -0.212e-8■□□□□ 11.2
DNMT1-208ENST00000586667 STIM1Q13586 685 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 NCAPHQ15003 741 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 DCAF4L1Q3SXM0 396 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 TWF2Q6IBS0 349 aaKnown RBP13.76□□□□□ -0.21
DNMT1-208ENST00000586667 LRSAM1Q6UWE0 723 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 CRELD2Q6UXH1 353 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-208ENST00000586667 HS2ST1Q7LGA3 356 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 ZBTB33Q86T24 672 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 GOLGA5Q8TBA6 731 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 SAAL1Q96ER3 474 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 FTHL17Q9BXU8 183 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 FAM105AQ9NUU6 356 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 RNF19AQ9NV58 838 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 HSPBP1Q9NZL4 362 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
DNMT1-208ENST00000586667 HES2Q9Y543 173 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 IPPQ9Y573 584 aa13.76□□□□□ -0.21
DNMT1-208ENST00000586667 A0A0U1RQF3 1178 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 CLIC2O15247 247 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 CLDN3O15551 220 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 CAPN15O75808 1086 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 HARSP12081 509 aaKnown RBP13.75□□□□□ -0.21
DNMT1-208ENST00000586667 NR2F2P24468 414 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 TNFSF9P41273 254 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 FAM189BP81408 668 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 SEZ6Q53EL9 994 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 CT47A1Q5JQC4 288 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-208ENST00000586667 TMEM240Q5SV17 173 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 RASIP1Q5U651 963 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 ARMCX5Q6P1M9 558 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
DNMT1-208ENST00000586667 FAM43BQ6ZT52 329 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-208ENST00000586667 CBWD2Q8IUF1 395 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 DHX40Q8IX18 779 aaKnown RBP13.75□□□□□ -0.21
DNMT1-208ENST00000586667 POMGNT1Q8WZA1 660 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 EEF2KMTQ96G04 330 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 BPIFA3Q9BQP9 254 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.75□□□□□ -0.214e-8■■□□□ 12.7
DNMT1-208ENST00000586667 MSTO1Q9BUK6 570 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 CXCL16Q9H2A7 254 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 CPSF3Q9UKF6 684 aaKnown RBP13.75□□□□□ -0.21
DNMT1-208ENST00000586667 PCDHB2Q9Y5E7 798 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 NR2E3Q9Y5X4 410 aa13.75□□□□□ -0.21
DNMT1-208ENST00000586667 CHD9Q3L8U1 2897 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 H0YGN5 161 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 ENPP3O14638 875 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 OGTO15294 1046 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 ZNF623O75123 536 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 AKAP3O75969 853 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 BAIAP3O94812 1187 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 GRM5P41594 1212 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 CASP4P49662 377 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 CYP2J2P51589 502 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 WDR5P61964 334 aaKnown RBP13.74□□□□□ -0.21
DNMT1-208ENST00000586667 DEFB103AP81534 67 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 MYBPC2Q14324 1141 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 IQCB1Q15051 598 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 ENOX2Q16206 610 aaKnown RBP13.74□□□□□ -0.21
DNMT1-208ENST00000586667 SLFN12LQ6IEE8 588 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 PSRC1Q6PGN9 363 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-208ENST00000586667 ZNF365Q70YC5 407 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 SLC24A5Q71RS6 500 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 MRPL10Q7Z7H8 261 aaKnown RBP13.74□□□□□ -0.21
DNMT1-208ENST00000586667 ECHDC2Q86YB7 292 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 IRF2BP1Q8IU81 584 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 PLEKHO2Q8TD55 490 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 PCIF1Q9H4Z3 704 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 RC3H2Q9HBD1 1191 aaKnown RBP13.74□□□□□ -0.21
DNMT1-208ENST00000586667 C1orf112Q9NSG2 853 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 CXXC1Q9P0U4 656 aaPredicted RBP13.74□□□□□ -0.21
DNMT1-208ENST00000586667 DACH1Q9UI36 760 aa13.74□□□□□ -0.21
DNMT1-208ENST00000586667 AGO2Q9UKV8 859 aaKnown RBP13.74□□□□□ -0.21
DNMT1-208ENST00000586667 CITO14578 2027 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 ABHD14A-ACY1A0A1B0GW23 586 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 BICDL2A1A5D9 508 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 GOLGA8IPA6NC78 632 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 GOLGA8JA6NMD2 632 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 INPPL1O15357 1258 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 CALUO43852 315 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-208ENST00000586667 EXTL3O43909 919 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 RECQL4O94761 1208 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 CXCL8P10145 99 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 ACOT2P49753 483 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 RAB27AP51159 221 aa13.73□□□□□ -0.21
DNMT1-208ENST00000586667 TMEM132AQ24JP5 1023 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms