RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 NR5A1Q13285 461 aa16.71■□□□□ 0.27
SF3A2-202ENST00000586396 PUM1Q14671 1186 aaKnown RBP eCLIP16.71■□□□□ 0.275e-7■□□□□ 8.4
SF3A2-202ENST00000586396 PHLDB3Q6NSJ2 640 aa16.71■□□□□ 0.27
SF3A2-202ENST00000586396 C4orf19Q8IY42 314 aa16.71■□□□□ 0.27
SF3A2-202ENST00000586396 PSPC1Q8WXF1 523 aaKnown RBP16.71■□□□□ 0.27
SF3A2-202ENST00000586396 RUBCNQ92622 972 aa16.71■□□□□ 0.27
SF3A2-202ENST00000586396 UBN1Q9NPG3 1134 aa16.71■□□□□ 0.27
SF3A2-202ENST00000586396 SH2B1Q9NRF2 756 aaPredicted RBP16.71■□□□□ 0.27
SF3A2-202ENST00000586396 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.71■□□□□ 0.27
SF3A2-202ENST00000586396 CACNA1IQ9P0X4 2223 aa16.71■□□□□ 0.27
SF3A2-202ENST00000586396 KMT2BQ9UMN6 2715 aaPredicted RBP16.7■□□□□ 0.26
SF3A2-202ENST00000586396 CCNT1O60563 726 aaKnown RBP16.7■□□□□ 0.26
SF3A2-202ENST00000586396 JAK2O60674 1132 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 LYPLA2O95372 231 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 P4HBP07237 508 aaKnown RBP16.7■□□□□ 0.26
SF3A2-202ENST00000586396 SPATA31D3P0C874 917 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 SP9P0CG40 484 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 ITGA4P13612 1032 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 NCLP19338 710 aaKnown RBP16.7■□□□□ 0.26
SF3A2-202ENST00000586396 MLH1P40692 756 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 QARSP47897 775 aaKnown RBP16.7■□□□□ 0.26
SF3A2-202ENST00000586396 EPHA7Q15375 998 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 UBXN11Q5T124 520 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 DCLRE1AQ6PJP8 1040 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 SPATA31D4Q6ZUB0 917 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 TAS1R1Q7RTX1 841 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 SRGAP1Q7Z6B7 1085 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 POTEDQ86YR6 584 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 C1orf210Q8IVY1 113 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 DIS3L2Q8IYB7 885 aaKnown RBP16.7■□□□□ 0.26
SF3A2-202ENST00000586396 PJA1Q8NG27 643 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 ZNF707Q96C28 371 aaPredicted RBP16.7■□□□□ 0.26
SF3A2-202ENST00000586396 ZSCAN31Q96LW9 406 aaPredicted RBP16.7■□□□□ 0.26
SF3A2-202ENST00000586396 PLEKHA4Q9H4M7 779 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 MINDY3Q9H8M7 445 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 BMP2KQ9NSY1 1161 aaPredicted RBP16.7■□□□□ 0.26
SF3A2-202ENST00000586396 DLGAP2Q9P1A6 1054 aa16.7■□□□□ 0.26
SF3A2-202ENST00000586396 ARL5CA6NH57 179 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 GAS2O43903 313 aaKnown RBP16.69■□□□□ 0.26
SF3A2-202ENST00000586396 NR1I2O75469 434 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 ERLIN2O94905 339 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 SRGAP2CP0DJJ0 459 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 LAMP2P13473 410 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 HMGN5P82970 282 aaKnown RBP16.69■□□□□ 0.26
SF3A2-202ENST00000586396 DSG1Q02413 1049 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 HTR4Q13639 388 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 PALB2Q86YC2 1186 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 GLYCTKQ8IVS8 523 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 EXOC8Q8IYI6 725 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 COLGALT2Q8IYK4 626 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 RNF168Q8IYW5 571 aaPredicted RBP16.69■□□□□ 0.26
SF3A2-202ENST00000586396 CNNM3Q8NE01 707 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 HDAC7Q8WUI4 952 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 MTMR9Q96QG7 549 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 DHX33Q9H6R0 707 aaKnown RBP16.69■□□□□ 0.26
SF3A2-202ENST00000586396 RXFP1Q9HBX9 757 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 ZDHHC7Q9NXF8 308 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 IPPQ9Y573 584 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 NUMBLQ9Y6R0 609 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 GPR179Q6PRD1 2367 aa16.69■□□□□ 0.26
SF3A2-202ENST00000586396 FAM205CA6NFA0 338 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 BTBD18B2RXH4 712 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 F8W810 466 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 TGM5O43548 720 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 KINO60870 393 aaKnown RBP16.68■□□□□ 0.26
SF3A2-202ENST00000586396 HOXA11P31270 313 aaPredicted RBP16.68■□□□□ 0.26
SF3A2-202ENST00000586396 SCNN1GP51170 649 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 NPEPPSP55786 919 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 LAMTOR4Q0VGL1 99 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 KIAA0319Q5VV43 1072 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 SMG8Q8ND04 991 aaKnown RBP16.68■□□□□ 0.26
SF3A2-202ENST00000586396 PRPF31Q8WWY3 499 aaKnown RBP16.68■□□□□ 0.26
SF3A2-202ENST00000586396 TMEM143Q96AN5 459 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 CEP170P1Q96L14 293 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 B3GALT6Q96L58 329 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 HSD17B14Q9BPX1 270 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 FOXQ1Q9C009 403 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 NT5C3AQ9H0P0 336 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 SLC2A4RGQ9NR83 387 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.68■□□□□ 0.26
SF3A2-202ENST00000586396 WRAP73Q9P2S5 460 aaPredicted RBP16.68■□□□□ 0.26
SF3A2-202ENST00000586396 SPTBN2O15020 2390 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 TPRP12270 2363 aaKnown RBP16.68■□□□□ 0.26
SF3A2-202ENST00000586396 COL4A3Q01955 1670 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 ACACBO00763 2458 aa16.68■□□□□ 0.26
SF3A2-202ENST00000586396 DOCK6Q96HP0 2047 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 RFC5P40937 340 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 DSC1Q08554 894 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 NOTUMQ6P988 496 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 DCLK2Q8N568 766 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 RNF149Q8NC42 400 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 ST13P5Q8NFI4 369 aaPredicted RBP16.67■□□□□ 0.26
SF3A2-202ENST00000586396 FBXO18Q8NFZ0 1043 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 SHDQ96IW2 340 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 ZFP42Q96MM3 310 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 GAD1Q99259 594 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 PRKD2Q9BZL6 878 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 FOXP1Q9H334 677 aaPredicted RBP16.67■□□□□ 0.26
SF3A2-202ENST00000586396 HES2Q9Y543 173 aa16.67■□□□□ 0.26
SF3A2-202ENST00000586396 POTEMA6NI47 508 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms