RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 BZW2Q9Y6E2 419 aaKnown RBP11.31□□□□□ -0.6
LIG3-203ENST00000585370 MCM3APO60318 1980 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 SSU72P8A0A1W2PR75 194 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 MOXD2PA6NHM9 499 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 USP27XA6NNY8 438 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 EIF3CLB5ME19 914 aaKnown RBP11.3□□□□□ -0.6
LIG3-203ENST00000585370 K7ERI5 159 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 NDUFA10O95299 355 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 LDHAP00338 332 aaKnown RBP11.3□□□□□ -0.6
LIG3-203ENST00000585370 CCDC172P0C7W6 258 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 RAG1P15918 1043 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 PON1P27169 355 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 ANXA13P27216 316 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 FMO5P49326 533 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 KLK7P49862 253 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 VAMP7P51809 220 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 SMAD3P84022 425 aaKnown RBP11.3□□□□□ -0.6
LIG3-203ENST00000585370 POU5F1BQ06416 359 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 TFDP1Q14186 410 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 KLHDC7AQ5VTJ3 777 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 SFMBT2Q5VUG0 894 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 WDR59Q6PJI9 974 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 TOGARAM2Q6ZUX3 1019 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 RRAGAQ7L523 313 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 PSPC1Q8WXF1 523 aaKnown RBP11.3□□□□□ -0.6
LIG3-203ENST00000585370 BAP1Q92560 729 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 CCDC42Q96M95 316 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 FBXL18Q96ME1 805 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 EIF3CQ99613 913 aaKnown RBP11.3□□□□□ -0.6
LIG3-203ENST00000585370 CDX2Q99626 313 aaPredicted RBP11.3□□□□□ -0.6
LIG3-203ENST00000585370 TTYH1Q9H313 450 aaPredicted RBP11.3□□□□□ -0.6
LIG3-203ENST00000585370 AIPL1Q9NZN9 384 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 MYO1AQ9UBC5 1043 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 ZNF215Q9UL58 517 aaPredicted RBP11.3□□□□□ -0.6
LIG3-203ENST00000585370 USP20Q9Y2K6 914 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 STYXL1Q9Y6J8 313 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 WDR81Q562E7 1941 aa11.3□□□□□ -0.6
LIG3-203ENST00000585370 COL1A2P08123 1366 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 CHD9Q3L8U1 2897 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 NOL4O94818 638 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 SERPING1P05155 500 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 C6orf222P0C671 652 aaPredicted RBP11.29□□□□□ -0.6
LIG3-203ENST00000585370 HOXD8P13378 290 aaPredicted RBP11.29□□□□□ -0.6
LIG3-203ENST00000585370 GLRA2P23416 452 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
LIG3-203ENST00000585370 LIG4P49917 911 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 CDK7P50613 346 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 GJA9P57773 515 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 POLR2FP61218 127 aaKnown RBP11.29□□□□□ -0.6
LIG3-203ENST00000585370 MAPK8IP2Q13387 824 aaPredicted RBP11.29□□□□□ -0.6
LIG3-203ENST00000585370 SPA17Q15506 151 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 ZBTB8OSQ8IWT0 167 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 TMEM143Q96AN5 459 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 BICD1Q96G01 975 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 MFSD14AQ96MC6 490 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 CHP1Q99653 195 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 CBWD1Q9BRT8 395 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 GANQ9H2C0 597 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 HAUS4Q9H6D7 363 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 NHEJ1Q9H9Q4 299 aaPredicted RBP11.29□□□□□ -0.6
LIG3-203ENST00000585370 LUC7LQ9NQ29 371 aaKnown RBP11.29□□□□□ -0.6
LIG3-203ENST00000585370 Q9Y3F1 56 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 R3HCC1Q9Y3T6 440 aaKnown RBP11.29□□□□□ -0.6
LIG3-203ENST00000585370 LRRC37A2A6NM11 1700 aa11.29□□□□□ -0.6
LIG3-203ENST00000585370 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.28□□□□□ -0.6
LIG3-203ENST00000585370 LRRIQ4A6NIV6 560 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 ZNF233A6NK53 670 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 LRRC53A6NM62 1247 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 DCDC2CA8MYV0 355 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 ANKRD63C9JTQ0 380 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
LIG3-203ENST00000585370 EXTL3O43909 919 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 LCA5LO95447 670 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 TIMP1P01033 207 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 LGALS2P05162 132 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 ASGR1P07306 291 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 UCHL3P15374 230 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 TMOD1P28289 359 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 NKX3-2P78367 333 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 CDC42EP1Q00587 391 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 FPGSQ05932 587 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 TUBB2AQ13885 445 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 SNRNP35Q16560 246 aaKnown RBP11.28□□□□□ -0.6
LIG3-203ENST00000585370 DGKDQ16760 1214 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 ARHGAP29Q52LW3 1261 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 GNASQ5JWF2 1037 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 SMYD5Q6GMV2 418 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 ZPBP2Q6X784 338 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.28□□□□□ -0.6
LIG3-203ENST00000585370 GPD1LQ8N335 351 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 CCDC155Q8N6L0 562 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 PCSK9Q8NBP7 692 aaKnown RBP11.28□□□□□ -0.6
LIG3-203ENST00000585370 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 ASAP3Q8TDY4 903 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
LIG3-203ENST00000585370 POMGNT1Q8WZA1 660 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 COPS5Q92905 334 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 FAM81BQ96LP2 452 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 RNPC3Q96LT9 517 aaKnown RBP11.28□□□□□ -0.6
LIG3-203ENST00000585370 GLT1D1Q96MS3 346 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms