RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 KREMEN1Q96MU8 473 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 RUNDC3BQ96NL0 473 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 KLC4Q9NSK0 619 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 MTUS1Q9ULD2 1270 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TCRBV7S2A1N4TA0A589 114 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TLDC2A0PJX2 215 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TCP10L2B9ZVM9 353 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CYP26A1O43174 497 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ATMINO43313 823 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 AGTP01019 485 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CYP1A2P05177 515 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 MMEP08473 750 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 COILP38432 576 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 RASA3Q14644 834 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SLMAPQ14BN4 828 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SLC47A2Q86VL8 602 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CCT6BQ92526 530 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ART4Q93070 314 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 AZI2Q9H6S1 392 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SLC40A1Q9NP59 571 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PKD2L1Q9P0L9 805 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 RARGP13631 454 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 IFI35P80217 286 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 FMO1Q01740 532 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SIX1Q15475 284 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TNFAIP8L3Q5GJ75 292 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CYFIP1Q7L576 1253 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CCDC105Q8IYK2 499 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZNF564Q8TBZ8 553 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SHC3Q92529 594 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 NUP85Q9BW27 656 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ACP6Q9NPH0 428 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 FBXO28Q9NVF7 368 aa15.25■□□□□ 0.03
CDK5RAP3-237ENST00000585163 RIPK2O43353 540 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 LYPLA2O95372 231 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 RARAP10276 462 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TNIP1Q15025 636 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 UBAP2Q5T6F2 1119 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 STYK1Q6J9G0 422 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 NIPA1Q7RTP0 329 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PPM1KQ8N3J5 372 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 C12orf50Q8NA57 414 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SELENOSQ9BQE4 189 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TAOK3Q9H2K8 898 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 KDM4CQ9H3R0 1056 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 YY1AP1Q9H869 796 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TMOD2Q9NZR1 351 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 FEM1BQ9UK73 627 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 GTF3C4Q9UKN8 822 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SPOPO43791 374 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ADRB2P07550 413 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SCTRP47872 440 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 QARSP47897 775 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 MFAP3P55082 362 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZYXQ15942 572 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 A1CFQ9NQ94 594 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 COL20A1Q9P218 1284 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 UVRAGQ9P2Y5 699 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PASKQ96RG2 1323 aa15.24■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SMIM23A6NLE4 172 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ANKRD63C9JTQ0 380 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ASAP2O43150 1006 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 GHRP10912 638 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CYP11B1P15538 503 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 FGFR4P22455 802 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TAX1BP1Q86VP1 789 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CPNE8Q86YQ8 564 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 EPS8L3Q8TE67 593 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 FAM151AQ8WW52 585 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SEMA4DQ92854 862 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 BTBD6Q96KE9 485 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 IWS1Q96ST2 819 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CCDC134Q9H6E4 229 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 LRRC19Q9H756 370 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 YDJCA8MPS7 323 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 H0YIN7 160 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 YWHABP31946 246 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 NCKAP1LP55160 1127 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 RWDD2BP57060 319 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 MAP2K1Q02750 393 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CHADLQ6NUI6 762 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PIGWQ7Z7B1 504 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CCDC197Q8NCU1 140 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 IL31RAQ8NI17 732 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZNF653Q96CK0 615 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 AGBL1Q96MI9 1066 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TIPINQ9BVW5 301 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 STMN4Q9H169 189 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 AGO4Q9HCK5 861 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PTPN22Q9Y2R2 807 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 COQ4Q9Y3A0 265 aa15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CLRN2A0PK11 232 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 RASGRF2O14827 1237 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SLC16A4O15374 487 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms