RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 MINDY3Q9H8M7 445 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 KCNMB3Q9NPA1 279 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 CHMP5Q9NZZ3 219 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 GIT1Q9Y2X7 761 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 IPPQ9Y573 584 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 ZFP37Q9Y6Q3 630 aaPredicted RBP11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 ARL5CA6NH57 179 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 INO80B-WBP1J3KQ70 363 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 SLC37A4O43826 429 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 CCNT1O60563 726 aaKnown RBP11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 PFKFB2O60825 505 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 MLH1P40692 756 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 AFF1P51825 1210 aaKnown RBP11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 PTENP60484 403 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 DSC1Q08554 894 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 PHLDB3Q6NSJ2 640 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 SMG8Q8ND04 991 aaKnown RBP11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 BORCS6Q96GS4 357 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 TBC1D17Q9HA65 648 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 MARCH5Q9NX47 278 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 FNIP2Q9P278 1114 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 VAV3Q9UKW4 847 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 CA14Q9ULX7 337 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 SIT1Q9Y3P8 196 aa11.92□□□□□ -0.5
CSNK1D-226ENST00000585026 NARSO43776 548 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 TSPAN1O60635 241 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 N4BP1O75113 896 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 TADA2AO75478 443 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 RFPL2O75678 378 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 PAPLNO95428 1278 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 LARGE1O95461 756 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 LAMP2P13473 410 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 SCNN1GP51170 649 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 NCAPH2Q6IBW4 605 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 FUT10Q6P4F1 479 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 TAS1R1Q7RTX1 841 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 PALB2Q86YC2 1186 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 RNF168Q8IYW5 571 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 RSAD2Q8WXG1 361 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 GTF3C6Q969F1 213 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 MYADMQ96S97 322 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 LLPHQ9BRT6 129 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 PRKD2Q9BZL6 878 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 NT5C3AQ9H0P0 336 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 CHST7Q9NS84 486 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 BMP2KQ9NSY1 1161 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 ADAM28Q9UKQ2 775 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 PLXNA3P51805 1871 aa11.91□□□□□ -0.5
CSNK1D-226ENST00000585026 KRBA1A5PL33 1030 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 DGAT1O75907 488 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 HNRNPA1P09651 372 aaKnown RBP eCLIP11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 ST3GAL1Q11201 340 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 GRIK3Q13003 919 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 LIN9Q5TKA1 542 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 PDXDC1Q6P996 788 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 DCLRE1AQ6PJP8 1040 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 GET4Q7L5D6 327 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 TPH2Q8IWU9 490 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 FEZF2Q8TBJ5 459 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 GPR152Q8TDT2 470 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 RIN2Q8WYP3 895 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 WASF1Q92558 559 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 ZNF707Q96C28 371 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 DYDC2Q96IM9 177 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 HINFPQ9BQA5 517 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 LARP6Q9BRS8 491 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 PHF20Q9BVI0 1012 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 APOL6Q9BWW8 343 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 EIF2AQ9BY44 585 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 NFKBIZQ9BYH8 718 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 BRMS1Q9HCU9 246 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 ARHGEF3Q9NR81 526 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 SLC2A4RGQ9NR83 387 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 RGL1Q9NZL6 768 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 GVINP1Q7Z2Y8 2422 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 ZMYM2Q9UBW7 1377 aa11.9□□□□□ -0.5
CSNK1D-226ENST00000585026 SF3B1O75533 1304 aaKnown RBP eCLIP11.89□□□□□ -0.516e-7■■■■■ 43.1
CSNK1D-226ENST00000585026 ANHXE9PGG2 379 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 TGM5O43548 720 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 XYLBO75191 536 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 ZMYND10O75800 440 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 EFEMP2O95967 443 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 SPATA31D3P0C874 917 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 MYBP10242 640 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 FSHRP23945 695 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 NUCB2P80303 420 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 SCRN1Q12765 414 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 STK3Q13188 491 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 CTTNQ14247 550 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 NPY5RQ15761 445 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 SPECC1Q5M775 1068 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 SLC27A1Q6PCB7 646 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 SPATA31D4Q6ZUB0 917 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 PIK3AP1Q6ZUJ8 805 aa11.89□□□□□ -0.51
CSNK1D-226ENST00000585026 C1orf210Q8IVY1 113 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms