RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 KIAA0319Q5VV43 1072 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 PPP4R3AQ6IN85 833 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 GET4Q7L5D6 327 aaPredicted RBP11.58□□□□□ -0.56
CASC3-210ENST00000584997 PALB2Q86YC2 1186 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 RNF168Q8IYW5 571 aaPredicted RBP11.58□□□□□ -0.56
CASC3-210ENST00000584997 SLC44A3Q8N4M1 653 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 HDAC7Q8WUI4 952 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 RIN2Q8WYP3 895 aaPredicted RBP11.58□□□□□ -0.56
CASC3-210ENST00000584997 CCDC51Q96ER9 411 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 CPB2Q96IY4 423 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 NAP1L4Q99733 375 aaKnown RBP11.58□□□□□ -0.56
CASC3-210ENST00000584997 HINFPQ9BQA5 517 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 COLEC11Q9BWP8 271 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 CSRNP2Q9H175 543 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 RNF39Q9H2S5 420 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.58□□□□□ -0.56
CASC3-210ENST00000584997 KCNJ14Q9UNX9 436 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 CYP46A1Q9Y6A2 500 aa11.58□□□□□ -0.56
CASC3-210ENST00000584997 DMXL1Q9Y485 3027 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 DOCK6Q96HP0 2047 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 MIA3Q5JRA6 1907 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 F8W810 466 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 TBX3O15119 743 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 TGM5O43548 720 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 XBP1P17861 261 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 PTENP60484 403 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 CYP4A11Q02928 519 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 CREMQ03060 361 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 CTTNQ14247 550 aaKnown RBP11.57□□□□□ -0.56
CASC3-210ENST00000584997 USP41Q3LFD5 358 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 C8orf34Q49A92 452 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 FUT10Q6P4F1 479 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 ZC3H14Q6PJT7 736 aaKnown RBP11.57□□□□□ -0.56
CASC3-210ENST00000584997 PIK3AP1Q6ZUJ8 805 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 TPH2Q8IWU9 490 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 GPR152Q8TDT2 470 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 ZNF707Q96C28 371 aaPredicted RBP11.57□□□□□ -0.56
CASC3-210ENST00000584997 ZNF274Q96GC6 653 aaPredicted RBP11.57□□□□□ -0.56
CASC3-210ENST00000584997 DYDC2Q96IM9 177 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 B3GALT6Q96L58 329 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 CCDC43Q96MW1 224 aaKnown RBP11.57□□□□□ -0.56
CASC3-210ENST00000584997 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
CASC3-210ENST00000584997 NT5C3AQ9H0P0 336 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 ZSWIM4Q9H7M6 989 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 ARHGEF3Q9NR81 526 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 ZDHHC7Q9NXF8 308 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.57□□□□□ -0.56
CASC3-210ENST00000584997 RGL1Q9NZL6 768 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 ADAM28Q9UKQ2 775 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 GIT1Q9Y2X7 761 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 R4GN57 208 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 CACNA1IQ9P0X4 2223 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 CEP250Q9BV73 2442 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 FANCMQ8IYD8 2048 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 OTOGLQ3ZCN5 2332 aa11.57□□□□□ -0.56
CASC3-210ENST00000584997 MYH15Q9Y2K3 1946 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 FRYLO94915 3013 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 BAG4O95429 457 aaKnown RBP11.56□□□□□ -0.56
CASC3-210ENST00000584997 EFEMP2O95967 443 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 C1RP00736 705 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 DCNP07585 359 aaKnown RBP11.56□□□□□ -0.56
CASC3-210ENST00000584997 LAMP2P13473 410 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 RPL17P18621 184 aaKnown RBP11.56□□□□□ -0.56
CASC3-210ENST00000584997 PHLDB3Q6NSJ2 640 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 SLFN12Q8IYM2 578 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 KIAA2013Q8IYS2 634 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 HAS1Q92839 578 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 PHF20Q9BVI0 1012 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 GPR62Q9BZJ7 368 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 PRKD2Q9BZL6 878 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 NXF3Q9H4D5 531 aaKnown RBP11.56□□□□□ -0.56
CASC3-210ENST00000584997 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 XPNPEP1Q9NQW7 623 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 CHST7Q9NS84 486 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 MIOSQ9NXC5 875 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 FNIP2Q9P278 1114 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 SIT1Q9Y3P8 196 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 RBM19Q9Y4C8 960 aaKnown RBP11.56□□□□□ -0.56
CASC3-210ENST00000584997 NUMBLQ9Y6R0 609 aa11.56□□□□□ -0.56
CASC3-210ENST00000584997 ZBTB39O15060 712 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 ZMYND10O75800 440 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 CDKL5O76039 1030 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 NPTXRO95502 500 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 ARF4P18085 180 aaPredicted RBP11.55□□□□□ -0.56
CASC3-210ENST00000584997 AKAP5P24588 427 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 MBTD1Q05BQ5 628 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 GRIK3Q13003 919 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 HTR4Q13639 388 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 CAPSQ13938 189 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 SLC27A1Q6PCB7 646 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 DCLRE1AQ6PJP8 1040 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 POTEDQ86YR6 584 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 GPR65Q8IYL9 337 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 RABGGTAQ92696 567 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 KLK14Q9P0G3 267 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 PARP2Q9UGN5 583 aa11.55□□□□□ -0.56
CASC3-210ENST00000584997 SF3B1O75533 1304 aaKnown RBP eCLIP11.55□□□□□ -0.565e-6■■■■□ 20.1
CASC3-210ENST00000584997 ZMYM2Q9UBW7 1377 aa11.54□□□□□ -0.56
CASC3-210ENST00000584997 ANHXE9PGG2 379 aa11.54□□□□□ -0.56
CASC3-210ENST00000584997 TADA2AO75478 443 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms