RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 B4GALT3O60512 393 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 TBCAO75347 108 aaKnown RBP17.85■□□□□ 0.45
ERBB2-222ENST00000584908 DDHD2O94830 711 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 KRT18P05783 430 aaKnown RBP17.85■□□□□ 0.45
ERBB2-222ENST00000584908 ABCD1P33897 745 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 MLH1P40692 756 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 ALDH7A1P49419 539 aaKnown RBP17.85■□□□□ 0.45
ERBB2-222ENST00000584908 DSC1Q08554 894 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 TMEM132AQ24JP5 1023 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 ZPBP2Q6X784 338 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 APBB1IPQ7Z5R6 666 aaPredicted RBP17.85■□□□□ 0.45
ERBB2-222ENST00000584908 ZNF280BQ86YH2 543 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 MYCT1Q8N699 235 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 PDILTQ8N807 584 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 SLC17A8Q8NDX2 589 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 LEO1Q8WVC0 666 aaPredicted RBP17.85■□□□□ 0.45
ERBB2-222ENST00000584908 POF1BQ8WVV4 589 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 MRPS27Q92552 414 aaKnown RBP17.85■□□□□ 0.45
ERBB2-222ENST00000584908 ZFP42Q96MM3 310 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 GAD1Q99259 594 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 TMEM175Q9BSA9 504 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 TARS2Q9BW92 718 aaKnown RBP17.85■□□□□ 0.45
ERBB2-222ENST00000584908 PANK2Q9BZ23 570 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 KBTBD4Q9NVX7 518 aa17.85■□□□□ 0.45
ERBB2-222ENST00000584908 SPTBN5Q9NRC6 3674 aaKnown RBP17.84■□□□□ 0.45
ERBB2-222ENST00000584908 FRMD3A2A2Y4 597 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 ZC3H11AO75152 810 aaKnown RBP eCLIP17.84■□□□□ 0.45
ERBB2-222ENST00000584908 GALTP07902 379 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 AKAP5P24588 427 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 PBX3P40426 434 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 GTF2BQ00403 316 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 RNASELQ05823 741 aaKnown RBP17.84■□□□□ 0.45
ERBB2-222ENST00000584908 STRN3Q13033 797 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 PDE12Q6L8Q7 609 aaKnown RBP17.84■□□□□ 0.45
ERBB2-222ENST00000584908 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.84■□□□□ 0.45
ERBB2-222ENST00000584908 IQUBQ8NA54 791 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 CDT1Q9H211 546 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 TNMDQ9H2S6 317 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 MIOSQ9NXC5 875 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 SEL1LQ9UBV2 794 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 DNAJB4Q9UDY4 337 aa17.84■□□□□ 0.45
ERBB2-222ENST00000584908 FSCN2O14926 492 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 TOM1L1O75674 476 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 POMCP01189 267 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 PIGRP01833 764 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 MCF2P10911 925 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 SCNN1GP51170 649 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 NUCB2P80303 420 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 ADALQ6DHV7 355 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 CNNM4Q6P4Q7 775 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 MPZL3Q6UWV2 235 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 DYMQ7RTS9 669 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 FAM178BQ8IXR5 827 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 COLGALT2Q8IYK4 626 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 IGSF21Q96ID5 467 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 SPATA32Q96LK8 384 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 APOL6Q9BWW8 343 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 STRA6Q9BX79 667 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 SCAND2PQ9GZW5 306 aaPredicted RBP17.83■□□□□ 0.44
ERBB2-222ENST00000584908 MAGEF1Q9HAY2 307 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 PRDM6Q9NQX0 595 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 TLR9Q9NR96 1032 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 SNTG2Q9NY99 539 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 PARP2Q9UGN5 583 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 TBX20Q9UMR3 447 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 COG5Q9UP83 839 aa17.83■□□□□ 0.44
ERBB2-222ENST00000584908 PDCD11Q14690 1871 aaKnown RBP17.82■□□□□ 0.44
ERBB2-222ENST00000584908 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.82■□□□□ 0.44
ERBB2-222ENST00000584908 K7ENM7 598 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 RECQL4O94761 1208 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 GAP43P17677 238 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 GRM5P41594 1212 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 SLC11A1P49279 550 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 KRT17Q04695 432 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 GRIK3Q13003 919 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 ZNF568Q3ZCX4 644 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 TCEAL5Q5H9L2 206 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 TMEM173Q86WV6 379 aaPredicted RBP17.82■□□□□ 0.44
ERBB2-222ENST00000584908 CHAMP1Q96JM3 812 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 PYM1Q9BRP8 204 aaKnown RBP17.82■□□□□ 0.44
ERBB2-222ENST00000584908 LRRC27Q9C0I9 530 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 OLFML3Q9NRN5 406 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 FAM13BQ9NYF5 915 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 THEGQ9P2T0 379 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 STK39Q9UEW8 545 aa17.82■□□□□ 0.44
ERBB2-222ENST00000584908 PUF60Q9UHX1 559 aaKnown RBP17.82■□□□□ 0.44
ERBB2-222ENST00000584908 NT5C1B-RDH14C9J2C7 533 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 PTGESO14684 152 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 NCK2O43639 380 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 PPP1R37O75864 691 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 EFEMP2O95967 443 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 CMA1P23946 247 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 IRS1P35568 1242 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 ERVFC1P60507 584 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 MCL1Q07820 350 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 XKR4Q5GH76 650 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 ZNF720Q7Z2F6 126 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 DDX53Q86TM3 631 aaKnown RBP17.81■□□□□ 0.44
ERBB2-222ENST00000584908 SFR1Q86XK3 245 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 MAP4K3Q8IVH8 894 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms