RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 SEPT1Q8WYJ6 367 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 OSMRQ99650 979 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 MINDY3Q9H8M7 445 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 PFASO15067 1338 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 ZNF233A6NK53 670 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 NPM3O75607 178 aaKnown RBP11.09□□□□□ -0.63
RFFL-212ENST00000584655 LMAN1P49257 510 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 JAK3P52333 1124 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 DMTNQ08495 405 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 WDR72Q3MJ13 1102 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 WDR44Q5JSH3 913 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 HASPINQ8TF76 798 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 CCDC51Q96ER9 411 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 EPB41L5Q9HCM4 733 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 GLTPD2A6NH11 291 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 TMEM191BP0C7N4 346 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 GPRC5AQ8NFJ5 357 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 BRI3BPQ8WY22 251 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 OSBPL9Q96SU4 736 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 NRBP2Q9NSY0 501 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 AMACRQ9UHK6 382 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 NFU1Q9UMS0 254 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 MAGED2Q9UNF1 606 aaPredicted RBP11.09□□□□□ -0.63
RFFL-212ENST00000584655 CST3P01034 146 aaPredicted RBP11.09□□□□□ -0.63
RFFL-212ENST00000584655 RGS7P49802 495 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 LONRF2Q1L5Z9 754 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 C8orf74Q6P047 294 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 MAATS1Q7Z4T9 603 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 CEP63Q96MT8 703 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 INPP4AQ96PE3 977 aaPredicted RBP11.09□□□□□ -0.63
RFFL-212ENST00000584655 C1orf112Q9NSG2 853 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 PARP2Q9UGN5 583 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 NAGPAQ9UK23 515 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 ZMYM2Q9UBW7 1377 aa11.09□□□□□ -0.63
RFFL-212ENST00000584655 GSTTP1A0A1W2PQM5 241 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 LRRIQ3A6PVS8 624 aaPredicted RBP11.08□□□□□ -0.64
RFFL-212ENST00000584655 HCRTO43612 131 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 GNA14O95837 355 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 PDGFRBP09619 1106 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 HPDP32754 393 aaPredicted RBP11.08□□□□□ -0.64
RFFL-212ENST00000584655 XKR3Q5GH77 459 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 OR2W6PQ8NHA6 318 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 SLC35G2Q8TBE7 412 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 NT5C1BQ96P26 610 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 METTL14Q9HCE5 456 aaKnown RBP11.08□□□□□ -0.64
RFFL-212ENST00000584655 DDX41Q9UJV9 622 aaKnown RBP11.08□□□□□ -0.64
RFFL-212ENST00000584655 PTPRJQ12913 1337 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 FRMPD4Q14CM0 1322 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 BUB1BO60566 1050 aaPredicted RBP11.08□□□□□ -0.64
RFFL-212ENST00000584655 SASH3O75995 380 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 ATF7P17544 494 aaPredicted RBP11.08□□□□□ -0.64
RFFL-212ENST00000584655 ATP1A2P50993 1020 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 HGSNATQ68CP4 663 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 ARHGAP39Q9C0H5 1083 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 LUC7LQ9NQ29 371 aaKnown RBP11.08□□□□□ -0.64
RFFL-212ENST00000584655 FAM49BQ9NUQ9 324 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 APEX2Q9UBZ4 518 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 POLIQ9UNA4 740 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 INPP5FQ9Y2H2 1132 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 KRIT1O00522 736 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 FGGP02679 453 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
RFFL-212ENST00000584655 SMTNL2Q2TAL5 461 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 CYP4F22Q6NT55 531 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 GOLGA6L1Q8N7Z2 621 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 PSPC1Q8WXF1 523 aaKnown RBP11.08□□□□□ -0.64
RFFL-212ENST00000584655 RNF25Q96BH1 459 aaPredicted RBP11.08□□□□□ -0.64
RFFL-212ENST00000584655 TRIM51Q9BSJ1 452 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 CXCL16Q9H2A7 254 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 PCSK1NQ9UHG2 260 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 NR2E1Q9Y466 385 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 PHLPP2Q6ZVD8 1323 aa11.08□□□□□ -0.64
RFFL-212ENST00000584655 FARP2O94887 1054 aaPredicted RBP11.07□□□□□ -0.64
RFFL-212ENST00000584655 HLA-DRAP01903 254 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 MYL6P60660 151 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 CAPSQ13938 189 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 HSP90B2PQ58FF3 399 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 ELOA2Q8IYF1 753 aaPredicted RBP11.07□□□□□ -0.64
RFFL-212ENST00000584655 UBA3Q8TBC4 463 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 CCDC114Q96M63 670 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 GOLGA2P5Q9HBQ8 144 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 TIMM13Q9Y5L4 95 aaPredicted RBP11.07□□□□□ -0.64
RFFL-212ENST00000584655 EIF3CLB5ME19 914 aaKnown RBP11.07□□□□□ -0.64
RFFL-212ENST00000584655 DGAT1O75907 488 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 IFNB1P01574 187 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 BCRP11274 1271 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 ELNP15502 786 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 OAS2P29728 719 aaKnown RBP11.07□□□□□ -0.64
RFFL-212ENST00000584655 SLC18A3Q16572 532 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 MAPK6Q16659 721 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 BRDTQ58F21 947 aaPredicted RBP11.07□□□□□ -0.64
RFFL-212ENST00000584655 SLC39A4Q6P5W5 647 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 FRMD5Q7Z6J6 570 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 KIAA0319LQ8IZA0 1049 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 KRT222Q8N1A0 295 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 LNX1Q8TBB1 728 aaPredicted RBP11.07□□□□□ -0.64
RFFL-212ENST00000584655 ATG4AQ8WYN0 398 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 FIZ1Q96SL8 496 aa11.07□□□□□ -0.64
RFFL-212ENST00000584655 EIF3CQ99613 913 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms