RNA–Protein interactions for RNA: ENST00000584601.5

ERBB2-219, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-219ENST00000584601 PPP1R16BQ96T49 567 aa12.98□□□□□ -0.33
ERBB2-219ENST00000584601 CELF4Q9BZC1 486 aaKnown RBP12.98□□□□□ -0.33
ERBB2-219ENST00000584601 PCDHA10Q9Y5I2 948 aa12.98□□□□□ -0.33
ERBB2-219ENST00000584601 NPHP3-ACAD11A0A0J9YXS1 232 aa12.98□□□□□ -0.33
ERBB2-219ENST00000584601 ADGRA1Q86SQ6 560 aa12.98□□□□□ -0.33
ERBB2-219ENST00000584601 SLC35G2Q8TBE7 412 aa12.98□□□□□ -0.33
ERBB2-219ENST00000584601 VCPKMTQ9H867 229 aa12.98□□□□□ -0.33
ERBB2-219ENST00000584601 THEGQ9P2T0 379 aa12.98□□□□□ -0.33
ERBB2-219ENST00000584601 SYNJ2BP-COX16A0A087WUM0 186 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 SLC9A1P19634 815 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.332e-8■□□□□ 8.4
ERBB2-219ENST00000584601 GRAMD1BQ3KR37 738 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 HAUS6Q7Z4H7 955 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 SNF8Q96H20 258 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 COX16Q9P0S2 106 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 NMT1P30419 496 aaKnown RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 GARSP41250 739 aaKnown RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 ARL4CP56559 192 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 TMPRSS15P98073 1019 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 NT5DC1Q5TFE4 455 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 ATG16L1Q676U5 607 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 KRT39Q6A163 491 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 DARS2Q6PI48 645 aaKnown RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 PACS2Q86VP3 889 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 CENPKQ9BS16 269 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 A0A087X0T9 212 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 FAM228BP0C875 321 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 HMGCS2P54868 508 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 MTMR2Q13614 643 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 ZNF667Q5HYK9 610 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 JAMLQ86YT9 394 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 SYN2Q92777 582 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 RBM41Q96IZ5 413 aaKnown RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 FAM193BQ96PV7 902 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 ERP44Q9BS26 406 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 SEPT10Q9P0V9 454 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 POLLQ9UGP5 575 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 DBR1Q9UK59 544 aaKnown RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 PPFIA2O75334 1257 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 KRT37O76014 449 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 PPM1FP49593 454 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 KRT17Q04695 432 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 SLC20A2Q08357 652 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 PPP2R5CQ13362 524 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 OR6B2Q6IFH4 312 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 ERICH1Q86X53 443 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 C7orf31Q8N865 590 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 MDM1Q8TC05 714 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 PSPC1Q8WXF1 523 aaKnown RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 RNF25Q96BH1 459 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-219ENST00000584601 SCYL1Q96KG9 808 aa12.97□□□□□ -0.33
ERBB2-219ENST00000584601 RASSF10A6NK89 507 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 SPAG7O75391 227 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 CDK17Q00537 523 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 EDRF1Q3B7T1 1238 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 REEP2Q9BRK0 252 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 SPECC1L-ADORA2AF8WAN1 911 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 COPEO14579 308 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 SLC16A3O15427 465 aaKnown RBP12.96□□□□□ -0.33
ERBB2-219ENST00000584601 PHF2O75151 1096 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 CDH16O75309 829 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 IFRD2Q12894 506 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-219ENST00000584601 RPS6KA2Q15349 733 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 Q3C1V9 767 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.96□□□□□ -0.33
ERBB2-219ENST00000584601 MICALL2Q8IY33 904 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 POLR3FQ9H1D9 316 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-219ENST00000584601 YY1AP1Q9H869 796 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 GEMIN8Q9NWZ8 242 aaKnown RBP12.96□□□□□ -0.33
ERBB2-219ENST00000584601 SIGLEC1Q9BZZ2 1709 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.33
ERBB2-219ENST00000584601 ZWINTO95229 277 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 SAT1P21673 171 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 ARFIP2P53365 341 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 HP1BP3Q5SSJ5 553 aaPredicted RBP12.96□□□□□ -0.34
ERBB2-219ENST00000584601 TRMT10CQ7L0Y3 403 aaKnown RBP12.96□□□□□ -0.34
ERBB2-219ENST00000584601 CRLF3Q8IUI8 442 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 HEXIM2Q96MH2 286 aaKnown RBP12.96□□□□□ -0.34
ERBB2-219ENST00000584601 AGPAT1Q99943 283 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 C11orf70Q9BRQ4 267 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 NOD2Q9HC29 1040 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 YWHABP31946 246 aaKnown RBP12.96□□□□□ -0.34
ERBB2-219ENST00000584601 STAT4Q14765 748 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 LONRF1Q17RB8 773 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 IZUMO3Q5VZ72 239 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 C3orf20Q8ND61 904 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 HIPK4Q8NE63 616 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 RTFDC1Q9BY42 306 aaPredicted RBP12.96□□□□□ -0.34
ERBB2-219ENST00000584601 STK33Q9BYT3 514 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 ARHGAP20Q9P2F6 1191 aa12.96□□□□□ -0.34
ERBB2-219ENST00000584601 EMSYQ7Z589 1322 aa12.95□□□□□ -0.34
ERBB2-219ENST00000584601 CFAP69A5D8W1 941 aa12.95□□□□□ -0.34
ERBB2-219ENST00000584601 CCND1P24385 295 aa12.95□□□□□ -0.34
ERBB2-219ENST00000584601 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
ERBB2-219ENST00000584601 SLC9A2Q9UBY0 812 aa12.95□□□□□ -0.34
ERBB2-219ENST00000584601 GPC4O75487 556 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms