RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 CDC42EP1Q00587 391 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 DSG1Q02413 1049 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 PRKCQQ04759 706 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 SCRN1Q12765 414 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 TARBP2Q15633 366 aaKnown RBP11.41□□□□□ -0.58
GGA3-219ENST00000584550 NTRK3Q16288 839 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 PFKFB3Q16875 520 aaPredicted RBP11.41□□□□□ -0.58
GGA3-219ENST00000584550 COLGALT2Q8IYK4 626 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 TRIM22Q8IYM9 498 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 NECAB1Q8N987 351 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 BORCS6Q96GS4 357 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 INO80BQ9C086 356 aaPredicted RBP11.41□□□□□ -0.58
GGA3-219ENST00000584550 PLEKHA4Q9H4M7 779 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 ZDHHC7Q9NXF8 308 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 CDH7Q9ULB5 785 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 POLIQ9UNA4 740 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 ASPMQ8IZT6 3477 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 NID2Q14112 1375 aa11.41□□□□□ -0.58
GGA3-219ENST00000584550 TBC1D4O60343 1298 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 PFKFB2O60825 505 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 LARGE1O95461 756 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 SRGAP2CP0DJJ0 459 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 TARSP26639 723 aaKnown RBP11.4□□□□□ -0.58
GGA3-219ENST00000584550 MTAPQ13126 283 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 ME3Q16798 604 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 UBXN11Q5T124 520 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 PRR23BQ6ZRT6 265 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 TPRG1Q6ZUI0 275 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 MRPL10Q7Z7H8 261 aaKnown RBP11.4□□□□□ -0.58
GGA3-219ENST00000584550 ZNF410Q86VK4 478 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 HDAC7Q8WUI4 952 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 NELL1Q92832 810 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 FGF13Q92913 245 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 CEP89Q96ST8 783 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 GAD1Q99259 594 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 KIF2CQ99661 725 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 RNF26Q9BY78 433 aaPredicted RBP11.4□□□□□ -0.58
GGA3-219ENST00000584550 NIFKQ9BYG3 293 aaKnown RBP11.4□□□□□ -0.58
GGA3-219ENST00000584550 GPR62Q9BZJ7 368 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 GLT8D2Q9H1C3 349 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 RNF39Q9H2S5 420 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 UNC45AQ9H3U1 944 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 IFT122Q9HBG6 1241 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 AGPAT5Q9NUQ2 364 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 MIOSQ9NXC5 875 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 RAB23Q9ULC3 237 aa11.4□□□□□ -0.58
GGA3-219ENST00000584550 ZFP37Q9Y6Q3 630 aaPredicted RBP11.4□□□□□ -0.58
GGA3-219ENST00000584550 CNTNAP2Q9UHC6 1331 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 FRYQ5TBA9 3013 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 IGKV6-21A0A0C4DH24 114 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 ARL5CA6NH57 179 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 DDX11L8A8MPP1 907 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 hCG_1984214I3L0E3 225 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 SLC30A4O14863 429 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 MSH4O15457 936 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 CCL16O15467 120 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 GDF9O60383 454 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 GAS7O60861 476 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 ZMYND10O75800 440 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 STBD1O95210 358 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 EFEMP2O95967 443 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 ITGA4P13612 1032 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 MLH1P40692 756 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 RBM25P49756 843 aaKnown RBP11.39□□□□□ -0.59
GGA3-219ENST00000584550 LILRA6Q6PI73 481 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 PRSS55Q6UWB4 352 aaPredicted RBP11.39□□□□□ -0.59
GGA3-219ENST00000584550 MTSS1LQ765P7 747 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 RNF168Q8IYW5 571 aaPredicted RBP11.39□□□□□ -0.59
GGA3-219ENST00000584550 ZNF713Q8N859 430 aaPredicted RBP11.39□□□□□ -0.59
GGA3-219ENST00000584550 ITFG1Q8TB96 612 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 LENG9Q96B70 501 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 ZFP42Q96MM3 310 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 APOL6Q9BWW8 343 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 OSBPL6Q9BZF3 934 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 MINDY3Q9H8M7 445 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 CHST7Q9NS84 486 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 VPS54Q9P1Q0 977 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 HES2Q9Y543 173 aa11.39□□□□□ -0.59
GGA3-219ENST00000584550 MAFO75444 373 aaPredicted RBP11.38□□□□□ -0.59
GGA3-219ENST00000584550 CDKL5O76039 1030 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 HOXB3P14651 431 aaPredicted RBP11.38□□□□□ -0.59
GGA3-219ENST00000584550 NCLP19338 710 aaKnown RBP11.38□□□□□ -0.59
GGA3-219ENST00000584550 HOXA11P31270 313 aaPredicted RBP11.38□□□□□ -0.59
GGA3-219ENST00000584550 SCNN1GP51170 649 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 NLRP5P59047 1200 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 PFKPQ01813 784 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 USP41Q3LFD5 358 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 LRCH2Q5VUJ6 765 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 PLA2G4FQ68DD2 849 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 MIER3Q7Z3K6 550 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 TEX2Q8IWB9 1127 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 REXO1Q8N1G1 1221 aaKnown RBP11.38□□□□□ -0.59
GGA3-219ENST00000584550 SMG8Q8ND04 991 aaKnown RBP11.38□□□□□ -0.59
GGA3-219ENST00000584550 NETO1Q8TDF5 533 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 CCDC12Q8WUD4 166 aaPredicted RBP11.38□□□□□ -0.59
GGA3-219ENST00000584550 ING5Q8WYH8 240 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 CLDN23Q96B33 292 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 AIFM3Q96NN9 605 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 PHF20Q9BVI0 1012 aa11.38□□□□□ -0.59
GGA3-219ENST00000584550 COLEC11Q9BWP8 271 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms