RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 PLEKHA8P1O95397 391 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 VEGFAP15692 232 aaPredicted RBP12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 RASA1P20936 1047 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FECHP22830 423 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PTPREP23469 700 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 LIFRP42702 1097 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ARFIP2P53365 341 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 IGBP1P78318 339 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MORC3Q14149 939 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SEC23AQ15436 765 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GPR162Q16538 588 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TBC1D10BQ4KMP7 808 aaPredicted RBP12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 LRRC8BQ6P9F7 803 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PIGOQ8TEQ8 1089 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SKA1Q96BD8 255 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CCDC51Q96ER9 411 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 NUDCD1Q96RS6 583 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MAGEC2Q9UBF1 373 aaPredicted RBP12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 USP20Q9Y2K6 914 aa12.71□□□□□ -0.38
CDK5RAP3-232ENST00000584168 A6NJR5 290 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SIGLEC16A6NMB1 481 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 BTBD19C9JJ37 291 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 UBL4AP11441 157 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 AKR1B1P15121 316 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FOSL1P15407 271 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ACADVLP49748 655 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 LMNB2Q03252 620 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SPIDRQ14159 915 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ERMARDQ5T6L9 678 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 NT5DC1Q5TFE4 455 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 AGAP9Q5VTM2 703 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 DNAJC1Q96KC8 554 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZDHHC15Q96MV8 337 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZNF317Q96PQ6 595 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FAM129AQ9BZQ8 928 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PCDHB6Q9Y5E3 794 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 DGKIO75912 1065 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GDF11O95390 407 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 HSPA1AP0DMV8 641 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 HSPA1BP0DMV9 641 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CYP2C9P11712 490 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 EMP3P54852 163 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 NR5A1Q13285 461 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 DCTN2Q13561 401 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SBK1Q52WX2 424 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CCDC122Q5T0U0 273 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 HAUS3Q68CZ6 603 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 LRIG3Q6UXM1 1119 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CNGA4Q8IV77 575 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FNDC8Q8TC99 324 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 WASF1Q92558 559 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ELAC2Q9BQ52 826 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 HAUS4Q9H6D7 363 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TTC7AQ9ULT0 858 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 NFU1Q9UMS0 254 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GIT1Q9Y2X7 761 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 STK36Q9NRP7 1315 aa12.7□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MATN2O00339 956 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FBP2O00757 339 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CTNND1O60716 968 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 IFNAR1P17181 557 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SLC16A2P36021 539 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 VHLP40337 213 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FKBP1AP62942 108 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ERVK-24P63145 666 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 RELAQ04206 551 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SPDYCQ5MJ68 293 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 HHIPL2Q6UWX4 724 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 USP49Q70CQ1 688 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CCDC84Q86UT8 332 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 IFT20Q8IY31 132 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 RIBC1Q8N443 379 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 LRRC45Q96CN5 670 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TMEM39BQ9GZU3 492 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PARVBQ9HBI1 364 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GPC6Q9Y625 555 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZNF541Q9H0D2 1346 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TNFRSF10AO00220 468 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CCR3P51677 355 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 LMBRD2Q68DH5 695 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CIAPIN1Q6FI81 312 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TRIM22Q8IYM9 498 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 LRRC47Q8N1G4 583 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CENPTQ96BT3 561 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PBKQ96KB5 322 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 NSMCE3Q96MG7 304 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CEP44Q9C0F1 390 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PSTPIP2Q9H939 334 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TRIM33Q9UPN9 1127 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SLC30A1Q9Y6M5 507 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MROH7Q68CQ1 1323 aa12.69□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TEX33O43247 280 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 UBTFL6P0CB48 400 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CDK4P11802 303 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms