RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SLC12A3P55017 1021 aa22.49■■□□□ 1.19
SS18-224ENST00000584083 MAPK7Q13164 816 aa22.49■■□□□ 1.19
SS18-224ENST00000584083 EEF1DP3Q658K8 133 aa22.49■■□□□ 1.19
SS18-224ENST00000584083 TMEM87AQ8NBN3 555 aa22.49■■□□□ 1.19
SS18-224ENST00000584083 RPS6KC1Q96S38 1066 aa22.49■■□□□ 1.19
SS18-224ENST00000584083 C17orf75Q9HAS0 396 aa22.49■■□□□ 1.19
SS18-224ENST00000584083 BARX2Q9UMQ3 279 aaPredicted RBP22.49■■□□□ 1.19
SS18-224ENST00000584083 PRG3Q9Y2Y8 225 aaPredicted RBP22.49■■□□□ 1.19
SS18-224ENST00000584083 C2orf71A6NGG8 1288 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 NR1I2O75469 434 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 GLP2RO95838 553 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 MARCKSP29966 332 aaPredicted RBP22.48■■□□□ 1.19
SS18-224ENST00000584083 RBM10P98175 930 aaKnown RBP22.48■■□□□ 1.19
SS18-224ENST00000584083 DHX8Q14562 1220 aaKnown RBP22.48■■□□□ 1.19
SS18-224ENST00000584083 KARSQ15046 597 aaKnown RBP22.48■■□□□ 1.19
SS18-224ENST00000584083 PTPAQ15257 358 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 NT5DC1Q5TFE4 455 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 ATF7IP2Q5U623 682 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 COLGALT2Q8IYK4 626 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 ZSCAN16Q9H4T2 348 aaPredicted RBP22.48■■□□□ 1.19
SS18-224ENST00000584083 SNTG2Q9NY99 539 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 KCND2Q9NZV8 630 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 CLEC1BQ9P126 229 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 RBM19Q9Y4C8 960 aaKnown RBP22.48■■□□□ 1.19
SS18-224ENST00000584083 PHLPP2Q6ZVD8 1323 aa22.48■■□□□ 1.19
SS18-224ENST00000584083 SPTBN5Q9NRC6 3674 aaKnown RBP22.47■■□□□ 1.19
SS18-224ENST00000584083 SLC16A4O15374 487 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 MBTPS2O43462 519 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 SRGAP2BP0DMP2 458 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 PLCG1P19174 1290 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 SMAD4Q13485 552 aaKnown RBP22.47■■□□□ 1.19
SS18-224ENST00000584083 DCAF4L1Q3SXM0 396 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 LLGL2Q6P1M3 1020 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 APBB1IPQ7Z5R6 666 aaPredicted RBP22.47■■□□□ 1.19
SS18-224ENST00000584083 FAM178BQ8IXR5 827 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 AUTS2Q8WXX7 1259 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 MSLNLQ96KJ4 702 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 ZBP1Q9H171 429 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 TMEM134Q9H6X4 195 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 KCNG1Q9UIX4 513 aa22.47■■□□□ 1.19
SS18-224ENST00000584083 NPHP3-ACAD11A0A0J9YXS1 232 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.46■■□□□ 1.19
SS18-224ENST00000584083 CTSAP10619 480 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 PLS3P13797 630 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 SMTNP53814 917 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 DSC1Q08554 894 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 SPECC1Q5M775 1068 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 GPBP1Q86WP2 473 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 GSTCDQ8NEC7 633 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 VN1R2Q8NFZ6 395 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 MRPL4Q9BYD3 311 aaKnown RBP22.46■■□□□ 1.19
SS18-224ENST00000584083 CCSER1Q9C0I3 900 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 ARHGAP28Q9P2N2 729 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 STK39Q9UEW8 545 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 GDAQ9Y2T3 454 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 ZMYM2Q9UBW7 1377 aa22.46■■□□□ 1.19
SS18-224ENST00000584083 MYH15Q9Y2K3 1946 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 TRIP11Q15643 1979 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 RECQL4O94761 1208 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 SSTR3P32745 418 aaPredicted RBP22.45■■□□□ 1.18
SS18-224ENST00000584083 CACNB1Q02641 598 aaPredicted RBP22.45■■□□□ 1.18
SS18-224ENST00000584083 GRIK3Q13003 919 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 GIT2Q14161 759 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 ARSHQ5FYA8 562 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 SPIRE2Q8WWL2 714 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 EPSTI1Q96J88 318 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 USP28Q96RU2 1077 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 COLEC11Q9BWP8 271 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 VN1R3Q9BXE9 311 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 FBXO2Q9UK22 296 aaPredicted RBP22.45■■□□□ 1.18
SS18-224ENST00000584083 TNFSF13BQ9Y275 285 aa22.45■■□□□ 1.18
SS18-224ENST00000584083 SRPRBQ9Y5M8 271 aaKnown RBP22.45■■□□□ 1.18
SS18-224ENST00000584083 BDP1A6H8Y1 2624 aa22.44■■□□□ 1.18
SS18-224ENST00000584083 KRT18P05783 430 aaKnown RBP22.44■■□□□ 1.18
SS18-224ENST00000584083 STRN3Q13033 797 aa22.44■■□□□ 1.18
SS18-224ENST00000584083 COASYQ13057 564 aa22.44■■□□□ 1.18
SS18-224ENST00000584083 MCM6Q14566 821 aa22.44■■□□□ 1.18
SS18-224ENST00000584083 SMAD2Q15796 467 aaKnown RBP22.44■■□□□ 1.18
SS18-224ENST00000584083 USP49Q70CQ1 688 aa22.44■■□□□ 1.18
SS18-224ENST00000584083 LRRC15Q8TF66 581 aa22.44■■□□□ 1.18
SS18-224ENST00000584083 RAD54LQ92698 747 aa22.44■■□□□ 1.18
SS18-224ENST00000584083 ACO2Q99798 780 aaKnown RBP22.44■■□□□ 1.18
SS18-224ENST00000584083 NTPCRQ9BSD7 190 aaKnown RBP22.44■■□□□ 1.18
SS18-224ENST00000584083 TARS2Q9BW92 718 aaKnown RBP22.44■■□□□ 1.18
SS18-224ENST00000584083 BLOC1S4Q9NUP1 217 aa22.44■■□□□ 1.18
SS18-224ENST00000584083 MARCH5Q9NX47 278 aa22.44■■□□□ 1.18
SS18-224ENST00000584083 LARSQ9P2J5 1176 aaKnown RBP22.44■■□□□ 1.18
SS18-224ENST00000584083 DAXXQ9UER7 740 aaPredicted RBP22.44■■□□□ 1.18
SS18-224ENST00000584083 CLASP2O75122 1294 aaKnown RBP22.43■■□□□ 1.18
SS18-224ENST00000584083 ZNF568Q3ZCX4 644 aa22.43■■□□□ 1.18
SS18-224ENST00000584083 FOXD4L5Q5VV16 416 aaPredicted RBP22.43■■□□□ 1.18
SS18-224ENST00000584083 TMEM184AQ6ZMB5 413 aa22.43■■□□□ 1.18
SS18-224ENST00000584083 TAS1R3Q7RTX0 852 aa22.43■■□□□ 1.18
SS18-224ENST00000584083 GJD3Q8N144 294 aa22.43■■□□□ 1.18
SS18-224ENST00000584083 SMRP1Q8NCR6 262 aa22.43■■□□□ 1.18
SS18-224ENST00000584083 FOXD4L4Q8WXT5 416 aaPredicted RBP22.43■■□□□ 1.18
SS18-224ENST00000584083 CLIC6Q96NY7 704 aa22.43■■□□□ 1.18
SS18-224ENST00000584083 REEP2Q9BRK0 252 aa22.43■■□□□ 1.18
SS18-224ENST00000584083 TCHPQ9BT92 498 aa22.43■■□□□ 1.18
SS18-224ENST00000584083 CD320Q9NPF0 282 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms