RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 CHMP5Q9NZZ3 219 aa3.39□□□□□ -1.87
CCDC178-213ENST00000583930 PCDHB10Q9UN67 800 aa3.39□□□□□ -1.87
CCDC178-213ENST00000583930 GSTTP1A0A1W2PQM5 241 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 KIF28PB7ZC32 967 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 PDE2AO00408 941 aaPredicted RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 MSH4O15457 936 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 AOC2O75106 756 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 MAFO75444 373 aaPredicted RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 BAIAP3O94812 1187 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 CAVIN2O95810 425 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SELPP16109 830 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 ARL2P36404 184 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 NCKAP1LP55160 1127 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 UBXN2AP68543 259 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 FAM189BP81408 668 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 PURAQ00577 322 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 CLCQ05315 142 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 ITGB3BPQ13352 177 aaPredicted RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 GADL1Q6ZQY3 521 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 RASGRP2Q7LDG7 609 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 VN1R5Q7Z5H4 357 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 MRPL10Q7Z7H8 261 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SERINC5Q86VE9 423 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 KAT2BQ92831 832 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 WDR89Q96FK6 387 aaPredicted RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 CEP295NLQ96MC4 621 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 R3HDMLQ9H3Y0 253 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 PFDN2Q9UHV9 154 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 TUBE1Q9UJT0 475 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 CFAP45Q9UL16 551 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 DERAQ9Y315 318 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 CITO14578 2027 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 NRCAMQ92823 1304 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 A0A0U1RQG5 324 aaPredicted RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 WDR64B1ANS9 1081 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 FAM86B1E9PN63 330 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 MAGEB2O15479 319 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 PRDM1O75626 825 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SGPL1O95470 568 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 EYA4O95677 639 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 CTSBP07858 339 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 FAM86B2P0C5J1 330 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 OR52Z1P0C646 297 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SPATA31C1P0DKV0 1188 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 UBA1P22314 1058 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 FGD1P98174 961 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 CACNB2Q08289 660 aaPredicted RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 ODR4Q5SWX8 454 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 LARP1BQ659C4 914 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 KCTD1Q719H9 257 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SYT2Q8N9I0 419 aaPredicted RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 ARRDC4Q8NCT1 418 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 C8orf76Q96K31 380 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 FEZ1Q99689 392 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 MTG1Q9BT17 334 aaPredicted RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 NOC4LQ9BVI4 516 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 CHST12Q9NRB3 414 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 FBXO28Q9NVF7 368 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 TMEM51Q9NW97 253 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 TBX21Q9UL17 535 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 ISY1Q9ULR0 285 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 COL4A3Q01955 1670 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 DNAJA2O60884 412 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 KIF4AO95239 1232 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 HSPA1AP0DMV8 641 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 HSPA1BP0DMV9 641 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 GAP43P17677 238 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 CDK11BP21127 795 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 GRK4P32298 578 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 NAPAP54920 295 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SLC12A3P55017 1021 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 HYAL2Q12891 473 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 BAATQ14032 418 aaPredicted RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 INPP5AQ14642 412 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 ZYXQ15942 572 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 IL17AQ16552 155 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 TTC38Q5R3I4 469 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SAMD5Q5TGI4 173 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 FAM160B1Q5W0V3 765 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 ANO1Q5XXA6 986 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 HAUS3Q68CZ6 603 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 DIS3L2Q8IYB7 885 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 ATP8B4Q8TF62 1192 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SHDQ96IW2 340 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 FIZ1Q96SL8 496 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 PBX4Q9BYU1 374 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SMARCAD1Q9H4L7 1026 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SNTG2Q9NY99 539 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 GTF2IRD1Q9UHL9 959 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 ABT1Q9ULW3 272 aaKnown RBP3.38□□□□□ -1.87
CCDC178-213ENST00000583930 STX8Q9UNK0 236 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 SMC3Q9UQE7 1217 aa3.38□□□□□ -1.87
CCDC178-213ENST00000583930 MUC22E2RYF6 1773 aaPredicted RBP3.37□□□□□ -1.87
CCDC178-213ENST00000583930 TMEM189-UBE2V1I3L0A0 370 aa3.37□□□□□ -1.87
CCDC178-213ENST00000583930 MPHOSPH10O00566 681 aaKnown RBP3.37□□□□□ -1.87
CCDC178-213ENST00000583930 ABLIM1O14639 778 aa3.37□□□□□ -1.87
CCDC178-213ENST00000583930 DDX3YO15523 660 aaKnown RBP3.37□□□□□ -1.87
CCDC178-213ENST00000583930 HBP1O60381 514 aa3.37□□□□□ -1.87
CCDC178-213ENST00000583930 C22orf31O95567 290 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms