RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 CASP5P51878 434 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 NUBP1P53384 320 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 NCKAP1LP55160 1127 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 NPEPPSP55786 919 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 GTF2BQ00403 316 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 PRKCEQ02156 737 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 LY6KQ17RY6 165 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 ODR4Q5SWX8 454 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 SLC9A9Q8IVB4 645 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 LRRC8AQ8IWT6 810 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 C12orf56Q8IXR9 622 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 CCDC150Q8NCX0 1101 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 ASIC4Q96FT7 647 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 CEP170P1Q96L14 293 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 CCDC43Q96MW1 224 aaKnown RBP13.09□□□□□ -0.31
GGA3-217ENST00000583667 TUBGCP2Q9BSJ2 902 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 ZHX3Q9H4I2 956 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 DHX33Q9H6R0 707 aaKnown RBP13.09□□□□□ -0.31
GGA3-217ENST00000583667 TMEM206Q9H813 350 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.09□□□□□ -0.31
GGA3-217ENST00000583667 Q9Y3F1 56 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 TELO2Q9Y4R8 837 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 CHD8Q9HCK8 2581 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 SIP14410 1827 aa13.09□□□□□ -0.31
GGA3-217ENST00000583667 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 CETN3O15182 167 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 TGFB1I1O43294 461 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
GGA3-217ENST00000583667 NCK2O43639 380 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 GH1P01241 217 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 MYBP10242 640 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.32
GGA3-217ENST00000583667 TCF7P36402 384 aaPredicted RBP13.08□□□□□ -0.32
GGA3-217ENST00000583667 PPP2R3AQ06190 1150 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 ARHGAP1Q07960 439 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 SIGLEC14Q08ET2 396 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 BFSP2Q13515 415 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 TCTN1Q2MV58 587 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 EPC2Q52LR7 807 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 UTP14CQ5TAP6 766 aaKnown RBP13.08□□□□□ -0.32
GGA3-217ENST00000583667 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 DGLUCYQ7Z3D6 616 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 TMC6Q7Z403 805 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 FRMD5Q7Z6J6 570 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 RPAINQ86UA6 219 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 FBXO16Q8IX29 292 aaPredicted RBP13.08□□□□□ -0.32
GGA3-217ENST00000583667 BBXQ8WY36 941 aaPredicted RBP13.08□□□□□ -0.32
GGA3-217ENST00000583667 RMDN1Q96DB5 314 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 IQCDQ96DY2 449 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 CNOT6LQ96LI5 555 aaKnown RBP13.08□□□□□ -0.32
GGA3-217ENST00000583667 MKNK1Q9BUB5 465 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 SMARCAD1Q9H4L7 1026 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 NSUN3Q9H649 340 aaKnown RBP13.08□□□□□ -0.32
GGA3-217ENST00000583667 PDGFCQ9NRA1 345 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 DMAC2Q9NW81 257 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 TBC1D7Q9P0N9 293 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.08□□□□□ -0.32
GGA3-217ENST00000583667 MCM3APO60318 1980 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 DMXL1Q9Y485 3027 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 ZNF292O60281 2723 aa13.08□□□□□ -0.32
GGA3-217ENST00000583667 CHD6Q8TD26 2715 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 H0YCG3 227 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 H3BNC9 293 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
GGA3-217ENST00000583667 TEX33O43247 280 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 GAS2O43903 313 aaKnown RBP13.07□□□□□ -0.32
GGA3-217ENST00000583667 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
GGA3-217ENST00000583667 USO1O60763 962 aaKnown RBP13.07□□□□□ -0.32
GGA3-217ENST00000583667 PPFIA4O75335 1185 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 PRPF6O94906 941 aaKnown RBP13.07□□□□□ -0.32
GGA3-217ENST00000583667 GCNT3O95395 438 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 TPM2P07951 284 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 NMT1P30419 496 aaKnown RBP13.07□□□□□ -0.32
GGA3-217ENST00000583667 SMTNP53814 917 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 PURAQ00577 322 aaKnown RBP13.07□□□□□ -0.32
GGA3-217ENST00000583667 ADAM9Q13443 819 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 MAN2A1Q16706 1144 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 NBPF20Q3BBV1 942 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 HSDL1Q3SXM5 330 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 DUSP28Q4G0W2 176 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 HSP90AA4PQ58FG1 418 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 FAM47CQ5HY64 1035 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 FIGNQ5HY92 759 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 EEPD1Q7L9B9 569 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 ATP8B4Q8TF62 1192 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 PPP1R13LQ8WUF5 828 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 CACTINQ8WUQ7 758 aaKnown RBP13.07□□□□□ -0.32
GGA3-217ENST00000583667 NKD2Q969F2 451 aaPredicted RBP13.07□□□□□ -0.32
GGA3-217ENST00000583667 ERGIC2Q96RQ1 377 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 KCNF1Q9H3M0 494 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 TMX1Q9H3N1 280 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 AZI2Q9H6S1 392 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 ATP6V0A4Q9HBG4 840 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 METTL14Q9HCE5 456 aaKnown RBP13.07□□□□□ -0.32
GGA3-217ENST00000583667 XPNPEP1Q9NQW7 623 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 INSL6Q9Y581 213 aa13.07□□□□□ -0.32
GGA3-217ENST00000583667 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.07□□□□□ -0.329e-8■■■■□ 21.7
GGA3-217ENST00000583667 CFAP47Q6ZTR5 3102 aa13.06□□□□□ -0.32
GGA3-217ENST00000583667 TPRP12270 2363 aaKnown RBP13.06□□□□□ -0.32
GGA3-217ENST00000583667 WDR81Q562E7 1941 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms