RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 HEBP1Q9NRV9 189 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 BARHL2Q9NY43 387 aa12.46□□□□□ -0.41
CASC3-208ENST00000583649 MRPS23Q9Y3D9 190 aaKnown RBP12.46□□□□□ -0.41
CASC3-208ENST00000583649 USP24Q9UPU5 2620 aa12.46□□□□□ -0.42
CASC3-208ENST00000583649 MYH9P35579 1960 aaKnown RBP12.45□□□□□ -0.42
CASC3-208ENST00000583649 GDF9O60383 454 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 GAS7O60861 476 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 RXRAP19793 462 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 AXLP30530 894 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 JAKMIP3Q5VZ66 844 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 B4GALNT3Q6L9W6 998 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 MICU3Q86XE3 530 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 PLEKHM2Q8IWE5 1019 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 KDF1Q8NAX2 398 aaPredicted RBP12.45□□□□□ -0.42
CASC3-208ENST00000583649 FAM3CQ92520 227 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 ELSPBP1Q96BH3 223 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 CCDC51Q96ER9 411 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 MSANTD3Q96H12 275 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 LOXL4Q96JB6 756 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 RIT2Q99578 217 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 TEKT3Q9BXF9 490 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 RWDD1Q9H446 243 aaPredicted RBP12.45□□□□□ -0.42
CASC3-208ENST00000583649 LMAN1LQ9HAT1 526 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 FBXW11Q9UKB1 542 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 ADAM28Q9UKQ2 775 aa12.45□□□□□ -0.42
CASC3-208ENST00000583649 ARL5CA6NH57 179 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 SH2B2O14492 632 aaPredicted RBP12.44□□□□□ -0.42
CASC3-208ENST00000583649 CCL16O15467 120 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 ZNF862O60290 1169 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 B4GALT3O60512 393 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 DKC1O60832 514 aaKnown RBP eCLIP12.44□□□□□ -0.42
CASC3-208ENST00000583649 GNA11P29992 359 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 CLK2P49760 499 aaKnown RBP12.44□□□□□ -0.42
CASC3-208ENST00000583649 ANTXR2P58335 489 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 DSC1Q08554 894 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 ELAVL2Q12926 359 aaKnown RBP12.44□□□□□ -0.42
CASC3-208ENST00000583649 TARBP2Q15633 366 aaKnown RBP12.44□□□□□ -0.42
CASC3-208ENST00000583649 NOTUMQ6P988 496 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 SPEM1Q8N4L4 309 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 TRMT61BQ9BVS5 477 aaKnown RBP12.44□□□□□ -0.42
CASC3-208ENST00000583649 ZFP14Q9HCL3 533 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 C6orf50Q9HD87 102 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 GIT1Q9Y2X7 761 aa12.44□□□□□ -0.42
CASC3-208ENST00000583649 DOCK8Q8NF50 2099 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 IGKV6-21A0A0C4DH24 114 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 ASAP2O43150 1006 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 CHMP2AO43633 222 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 MAFO75444 373 aaPredicted RBP12.43□□□□□ -0.42
CASC3-208ENST00000583649 KCNK5O95279 499 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 ZNF806P0C7X5 589 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 TDGF1P13385 188 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 MLH1P40692 756 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 DRP2Q13474 957 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 AAMPQ13685 434 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 STPG1Q5TH74 334 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 LRCH2Q5VUJ6 765 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 NPAS3Q8IXF0 933 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 REXO1Q8N1G1 1221 aaKnown RBP12.43□□□□□ -0.42
CASC3-208ENST00000583649 ITFG1Q8TB96 612 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 BICD2Q8TD16 824 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 PSPC1Q8WXF1 523 aaKnown RBP12.43□□□□□ -0.42
CASC3-208ENST00000583649 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 GAD1Q99259 594 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 TTPALQ9BTX7 342 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 APOL6Q9BWW8 343 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 PPME1Q9Y570 386 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 COL4A3BPQ9Y5P4 624 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 V9GY48 417 aaPredicted RBP12.43□□□□□ -0.42
CASC3-208ENST00000583649 MYH15Q9Y2K3 1946 aa12.43□□□□□ -0.42
CASC3-208ENST00000583649 DDX11L8A8MPP1 907 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 ZNF197O14709 1029 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 HRO43593 1189 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 EFEMP2O95967 443 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 RPL17P18621 184 aaKnown RBP12.42□□□□□ -0.42
CASC3-208ENST00000583649 AFF1P51825 1210 aaKnown RBP12.42□□□□□ -0.42
CASC3-208ENST00000583649 NTHL1P78549 312 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 FZD5Q13467 585 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 AXDND1Q5T1B0 1012 aaPredicted RBP12.42□□□□□ -0.42
CASC3-208ENST00000583649 MIER3Q7Z3K6 550 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 CEP57Q86XR8 500 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 FAM160A2Q8N612 972 aaPredicted RBP12.42□□□□□ -0.42
CASC3-208ENST00000583649 SLC7A14Q8TBB6 771 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 FAM200AQ8TCP9 573 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 TCP11Q8WWU5 503 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 LSM14BQ9BX40 385 aaKnown RBP12.42□□□□□ -0.42
CASC3-208ENST00000583649 GPR62Q9BZJ7 368 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 TRPV5Q9NQA5 729 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 IPPQ9Y573 584 aa12.42□□□□□ -0.42
CASC3-208ENST00000583649 C1QTNF9BB2RNN3 333 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 CHURC1-FNTBB4DL54 471 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 C1QTNF9P0C862 333 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 SRGAP2CP0DJJ0 459 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 CIITAP33076 1130 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 FNTBP49356 437 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 SCNN1GP51170 649 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 MLLT6P55198 1093 aaPredicted RBP12.41□□□□□ -0.42
CASC3-208ENST00000583649 GRIK3Q13003 919 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 PSMD5Q16401 504 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 RTN1Q16799 776 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 DAB2IPQ5VWQ8 1189 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms