RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 DPYDQ12882 1025 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 MTMR1Q13613 665 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 CUL4BQ13620 913 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 NEDD9Q14511 834 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 WHAMMP3Q1A5X7 153 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 PAN2Q504Q3 1202 aaKnown RBP10.85□□□□□ -0.67
MKS1-212ENST00000583577 CEP55Q53EZ4 464 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 NAALADL2Q58DX5 795 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 ANKRD54Q6NXT1 300 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 LLGL2Q6P1M3 1020 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 SYCE2Q6PIF2 218 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 TXLNBQ8N3L3 684 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 GIMAP8Q8ND71 665 aaPredicted RBP10.85□□□□□ -0.67
MKS1-212ENST00000583577 EHBP1Q8NDI1 1231 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 TBCKQ8TEA7 893 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 ATP6V0A1Q93050 837 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 MXRA8Q9BRK3 442 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 UBXN6Q9BZV1 441 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 ACBD3Q9H3P7 528 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 MLXIPQ9HAP2 919 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 JADE2Q9NQC1 790 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 LIMD1Q9UGP4 676 aa10.85□□□□□ -0.67
MKS1-212ENST00000583577 CDV3Q9UKY7 258 aaKnown RBP10.85□□□□□ -0.67
MKS1-212ENST00000583577 ASH1LQ9NR48 2969 aaKnown RBP10.85□□□□□ -0.67
MKS1-212ENST00000583577 A0A1W2PQC6 194 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 C17orf102A2RUQ5 167 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 SPATA31C2B4DYI2 1134 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 GGPS1O95749 300 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 ITGB5P18084 799 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 UBA1P22314 1058 aaKnown RBP10.84□□□□□ -0.67
MKS1-212ENST00000583577 USP11P51784 963 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 SETQ01105 290 aaPredicted RBP10.84□□□□□ -0.67
MKS1-212ENST00000583577 LAMC2Q13753 1193 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 KCNB1Q14721 858 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 DUSP6Q16828 381 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 CELF3Q5SZQ8 465 aaKnown RBP10.84□□□□□ -0.67
MKS1-212ENST00000583577 ZC3H14Q6PJT7 736 aaKnown RBP10.84□□□□□ -0.67
MKS1-212ENST00000583577 NIPA1Q7RTP0 329 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 SRGAP1Q7Z6B7 1085 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 OXER1Q8TDS5 423 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 ZNF689Q96CS4 500 aaPredicted RBP10.84□□□□□ -0.67
MKS1-212ENST00000583577 PAGE5Q96GU1 130 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 SENP7Q9BQF6 1050 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 CSRNP2Q9H175 543 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 POMKQ9H5K3 350 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 INTS13Q9NVM9 706 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 CDC23Q9UJX2 597 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 PCDHB6Q9Y5E3 794 aa10.84□□□□□ -0.67
MKS1-212ENST00000583577 FNDC1Q4ZHG4 1894 aaPredicted RBP10.84□□□□□ -0.67
MKS1-212ENST00000583577 HELZ2Q9BYK8 2649 aaKnown RBP10.83□□□□□ -0.68
MKS1-212ENST00000583577 MEIS1O00470 390 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 TREHO43280 583 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 SORBS3O60504 671 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 MFAP3LO75121 409 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 DGKIO75912 1065 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 CIITAP33076 1130 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 SP2Q02086 613 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 DMWDQ09019 674 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 NR5A1Q13285 461 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 STIM1Q13586 685 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 NAA30Q147X3 362 aaPredicted RBP10.83□□□□□ -0.68
MKS1-212ENST00000583577 INF2Q27J81 1249 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 TTC38Q5R3I4 469 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 ZNF658Q5TYW1 1059 aaPredicted RBP10.83□□□□□ -0.68
MKS1-212ENST00000583577 CC2D1AQ6P1N0 951 aaPredicted RBP10.83□□□□□ -0.68
MKS1-212ENST00000583577 CYP26C1Q6V0L0 522 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 PIK3AP1Q6ZUJ8 805 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 CYFIP1Q7L576 1253 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 PDILTQ8N807 584 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 IGSF22Q8N9C0 903 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 MSANTD4Q8NCY6 345 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 CRYGNQ8WXF5 182 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 TNFRSF25Q93038 417 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 CCDC47Q96A33 483 aaKnown RBP10.83□□□□□ -0.68
MKS1-212ENST00000583577 EMID1Q96A84 441 aaPredicted RBP10.83□□□□□ -0.68
MKS1-212ENST00000583577 SPATA33Q96N06 139 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 NAP1L4Q99733 375 aaKnown RBP10.83□□□□□ -0.68
MKS1-212ENST00000583577 NUP58Q9BVL2 599 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 CARD6Q9BX69 1037 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 ERVK-5Q9HDB9 667 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 KCNH7Q9NS40 1196 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 ZNHIT6Q9NWK9 470 aaKnown RBP10.83□□□□□ -0.68
MKS1-212ENST00000583577 ZNF446Q9NWS9 450 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 NCDNQ9UBB6 729 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 FBXL21Q9UKT6 434 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 RAB21Q9UL25 225 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 ADGRG1Q9Y653 693 aa10.83□□□□□ -0.68
MKS1-212ENST00000583577 MIA3Q5JRA6 1907 aa10.82□□□□□ -0.68
MKS1-212ENST00000583577 A0A087WWV3 80 aa10.82□□□□□ -0.68
MKS1-212ENST00000583577 CTAGE9A4FU28 777 aa10.82□□□□□ -0.68
MKS1-212ENST00000583577 FAM86B1E9PN63 330 aa10.82□□□□□ -0.68
MKS1-212ENST00000583577 NOP56O00567 594 aaKnown RBP10.82□□□□□ -0.68
MKS1-212ENST00000583577 ENPP3O14638 875 aa10.82□□□□□ -0.68
MKS1-212ENST00000583577 FAM86B2P0C5J1 330 aa10.82□□□□□ -0.68
MKS1-212ENST00000583577 RFX1P22670 979 aa10.82□□□□□ -0.68
MKS1-212ENST00000583577 EEF1GP26641 437 aaKnown RBP10.82□□□□□ -0.68
MKS1-212ENST00000583577 PRPHP41219 470 aa10.82□□□□□ -0.68
MKS1-212ENST00000583577 LETM2Q2VYF4 491 aa10.82□□□□□ -0.68
MKS1-212ENST00000583577 PRR16Q569H4 304 aa10.82□□□□□ -0.68
MKS1-212ENST00000583577 MOXD1Q6UVY6 613 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms