RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FNIP2Q9P278 1114 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 FBXO4Q9UKT5 387 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 CDH7Q9ULB5 785 aa13.73□□□□□ -0.21
TOP3A-215ENST00000583328 CYP3A7-CYP3A51PA0A087WV96 503 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 FAM170BA6NMN3 283 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 ASAP2O43150 1006 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 CDC45O75419 566 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 CPA1P15085 419 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 RPL17P18621 184 aaKnown RBP13.72□□□□□ -0.21
TOP3A-215ENST00000583328 CYP3A7P24462 503 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 AXLP30530 894 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
TOP3A-215ENST00000583328 CREMQ03060 361 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 PRKCQQ04759 706 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 MLF2Q15773 248 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-215ENST00000583328 NOTUMQ6P988 496 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 GPR65Q8IYL9 337 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
TOP3A-215ENST00000583328 FGF14Q92915 247 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 ZFP42Q96MM3 310 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 SLKQ9H2G2 1235 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-215ENST00000583328 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
TOP3A-215ENST00000583328 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-215ENST00000583328 GIT1Q9Y2X7 761 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 MTF2Q9Y483 593 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-215ENST00000583328 HES2Q9Y543 173 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 PPME1Q9Y570 386 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 PCDHGA2Q9Y5H1 932 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 CACNA1IQ9P0X4 2223 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 C2orf16Q68DN1 1984 aa13.72□□□□□ -0.21
TOP3A-215ENST00000583328 PRR5-ARHGAP8B1AHC4 643 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 EML1O00423 815 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 TADA2AO75478 443 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 RFC5P40937 340 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 NTHL1P78549 312 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 ARHGAP8P85298 464 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 MTSS1LQ765P7 747 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 FERMT3Q86UX7 667 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 HACE1Q8IYU2 909 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 ETNPPLQ8TBG4 499 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 TCP11Q8WWU5 503 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 CCDC51Q96ER9 411 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 MBOAT7Q96N66 472 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 OSBPL6Q9BZF3 934 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 TRIM6Q9C030 488 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-215ENST00000583328 CSRNP2Q9H175 543 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 SH3GLB2Q9NR46 395 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 DDX25Q9UHL0 483 aaKnown RBP13.71□□□□□ -0.21
TOP3A-215ENST00000583328 ADAM28Q9UKQ2 775 aa13.71□□□□□ -0.21
TOP3A-215ENST00000583328 CDV3Q9UKY7 258 aaKnown RBP13.71□□□□□ -0.21
TOP3A-215ENST00000583328 INO80B-WBP1J3KQ70 363 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 TSPAN1O60635 241 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 P4HBP07237 508 aaKnown RBP13.7□□□□□ -0.22
TOP3A-215ENST00000583328 IFNAR1P17181 557 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 MAGEA9P43362 315 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 PFKPQ01813 784 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 PCBP1Q15365 356 aaKnown RBP eCLIP13.7□□□□□ -0.22
TOP3A-215ENST00000583328 NTRK3Q16288 839 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 PPM1LQ5SGD2 360 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 ZBTB41Q5SVQ8 909 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 LIN9Q5TKA1 542 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 MOXD1Q6UVY6 613 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 OTUD6AQ7L8S5 288 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 RABGGTAQ92696 567 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 DDX23Q9BUQ8 820 aaKnown RBP13.7□□□□□ -0.22
TOP3A-215ENST00000583328 ZSCAN32Q9NX65 697 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 PCDHA4Q9UN74 947 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 POLIQ9UNA4 740 aa13.7□□□□□ -0.22
TOP3A-215ENST00000583328 SMG5Q9UPR3 1016 aaKnown RBP13.7□□□□□ -0.22
TOP3A-215ENST00000583328 DCDC2BA2VCK2 349 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 NCAM2O15394 837 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 XYLBO75191 536 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 HNRNPA1P09651 372 aaKnown RBP eCLIP13.69□□□□□ -0.22
TOP3A-215ENST00000583328 CD72P21854 359 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 AKAP5P24588 427 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 PTENP60484 403 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 CCT2P78371 535 aaKnown RBP13.69□□□□□ -0.22
TOP3A-215ENST00000583328 LMNB2Q03252 620 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 PPP2R5CQ13362 524 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 EMC2Q15006 297 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 PRSS55Q6UWB4 352 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-215ENST00000583328 RSPO2Q6UXX9 243 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-215ENST00000583328 BLIDQ8IZY5 108 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 FGF13Q92913 245 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 JAKMIP1Q96N16 626 aaKnown RBP13.69□□□□□ -0.22
TOP3A-215ENST00000583328 MTRQ99707 1265 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 LTB4R2Q9NPC1 389 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 WRAP73Q9P2S5 460 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-215ENST00000583328 PARP2Q9UGN5 583 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 FBXW11Q9UKB1 542 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 SPTBN2O15020 2390 aa13.69□□□□□ -0.22
TOP3A-215ENST00000583328 CCL16O15467 120 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 C8AP07357 584 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 YWHABP31946 246 aaKnown RBP13.68□□□□□ -0.22
TOP3A-215ENST00000583328 SSRP1Q08945 709 aaKnown RBP13.68□□□□□ -0.22
TOP3A-215ENST00000583328 TFDP1Q14186 410 aa13.68□□□□□ -0.22
TOP3A-215ENST00000583328 MXD4Q14582 209 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms