RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC57-216ENST00000582885 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 CCDC40Q4G0X9 1142 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 CEP135Q66GS9 1140 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 NOTUMQ6P988 496 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 APTXQ7Z2E3 356 aaKnown RBP13.1□□□□□ -0.31
CCDC57-216ENST00000582885 FAM228AQ86W67 206 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 TRIM59Q8IWR1 403 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 FAM186BQ8IYM0 893 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 GPD1LQ8N335 351 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 ZBTB45Q96K62 511 aaPredicted RBP13.1□□□□□ -0.31
CCDC57-216ENST00000582885 TCHPQ9BT92 498 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 HAPLN2Q9GZV7 340 aa13.1□□□□□ -0.31
CCDC57-216ENST00000582885 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
CCDC57-216ENST00000582885 TDRD15B5MCY1 1934 aaKnown RBP13.09□□□□□ -0.31
CCDC57-216ENST00000582885 BRCA2P51587 3418 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 FAM189A1O60320 539 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 CTSHP09668 335 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 CASP4P49662 377 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 LPIN1Q14693 890 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 KRT31Q15323 416 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 SNRNP35Q16560 246 aaKnown RBP13.09□□□□□ -0.31
CCDC57-216ENST00000582885 MAN2A1Q16706 1144 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 TMEM132AQ24JP5 1023 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 DCAF4L1Q3SXM0 396 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 ZNF568Q3ZCX4 644 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 EEF1DP3Q658K8 133 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 SLC27A1Q6PCB7 646 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 INTS8Q75QN2 995 aaKnown RBP13.09□□□□□ -0.31
CCDC57-216ENST00000582885 LRRC8DQ7L1W4 858 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 EEF2KMTQ96G04 330 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 MFSD14AQ96MC6 490 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 ADPGKQ9BRR6 497 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 TUBGCP2Q9BSJ2 902 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 NOC4LQ9BVI4 516 aaKnown RBP13.09□□□□□ -0.31
CCDC57-216ENST00000582885 CDT1Q9H211 546 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 ERVK-5Q9HDB9 667 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 ANKFY1Q9P2R3 1169 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 TBX21Q9UL17 535 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 ST3GAL5Q9UNP4 418 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 USP20Q9Y2K6 914 aa13.09□□□□□ -0.31
CCDC57-216ENST00000582885 A0A1B0GTH6 734 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 ZNF233A6NK53 670 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 CBFA2T2O43439 604 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 SERPINC1P01008 464 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 TPM2P07951 284 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
CCDC57-216ENST00000582885 FGFR4P22455 802 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCDC57-216ENST00000582885 MTIF2P46199 727 aaKnown RBP13.08□□□□□ -0.32
CCDC57-216ENST00000582885 COPB1P53618 953 aaKnown RBP13.08□□□□□ -0.32
CCDC57-216ENST00000582885 LRRC26Q2I0M4 334 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 FILIP1LQ4L180 1135 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 HSP90AA4PQ58FG1 418 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 CRELD2Q6UXH1 353 aaPredicted RBP13.08□□□□□ -0.32
CCDC57-216ENST00000582885 USP37Q86T82 979 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 CPB2Q96IY4 423 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 TRAIPQ9BWF2 469 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 AGO3Q9H9G7 860 aaKnown RBP13.08□□□□□ -0.32
CCDC57-216ENST00000582885 CPSF3Q9UKF6 684 aaKnown RBP13.08□□□□□ -0.32
CCDC57-216ENST00000582885 PADI3Q9ULW8 664 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 LTBP2Q14767 1821 aa13.08□□□□□ -0.32
CCDC57-216ENST00000582885 TTC3P53804 2025 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 AP5Z1O43299 807 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 TPM3P06753 285 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 CLTBP09497 229 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 KRT13P13646 458 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 UBASH3AP57075 661 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 CYP24A1Q07973 514 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 BFSP1Q12934 665 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 PAK2Q13177 524 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 MBTPS1Q14703 1052 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 NR1I3Q14994 352 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 SURF1Q15526 300 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 ZBTB33Q86T24 672 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 CBWD2Q8IUF1 395 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 SAAL1Q96ER3 474 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 MRFAP1L1Q96HT8 127 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 FAM213AQ9BRX8 229 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 TRIM5Q9C035 493 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 HIPK3Q9H422 1215 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
CCDC57-216ENST00000582885 IFNKQ9P0W0 207 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 PIN4Q9Y237 131 aaKnown RBP13.07□□□□□ -0.32
CCDC57-216ENST00000582885 ATP11BQ9Y2G3 1177 aa13.07□□□□□ -0.32
CCDC57-216ENST00000582885 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC57-216ENST00000582885 GOLGA8IPA6NC78 632 aa13.06□□□□□ -0.32
CCDC57-216ENST00000582885 GOLGA8JA6NMD2 632 aa13.06□□□□□ -0.32
CCDC57-216ENST00000582885 LGALS16A8MUM7 142 aa13.06□□□□□ -0.32
CCDC57-216ENST00000582885 KIAA0355O15063 1070 aa13.06□□□□□ -0.32
CCDC57-216ENST00000582885 STX10O60499 249 aa13.06□□□□□ -0.32
CCDC57-216ENST00000582885 ADRB2P07550 413 aa13.06□□□□□ -0.32
CCDC57-216ENST00000582885 CLTAP09496 248 aa13.06□□□□□ -0.32
CCDC57-216ENST00000582885 GHRP10912 638 aa13.06□□□□□ -0.32
CCDC57-216ENST00000582885 CD52P31358 61 aa13.06□□□□□ -0.32
CCDC57-216ENST00000582885 RFC2P35250 354 aa13.06□□□□□ -0.32
CCDC57-216ENST00000582885 GRM5P41594 1212 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms